Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
PCDHA4Q9UN74 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 CDV3P1-201ENST00000471403 739 ntBASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA4Q9UN74 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA4Q9UN74 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHA4Q9UN74 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PCDHA4Q9UN74 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHA4Q9UN74 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA4Q9UN74 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHA4Q9UN74 AC006128.1-201ENST00000624704 1661 ntBASIC23.65■■□□□ 1.38
PCDHA4Q9UN74 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA4Q9UN74 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA4Q9UN74 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHA4Q9UN74 AC016405.3-201ENST00000607710 860 ntBASIC23.65■■□□□ 1.38
PCDHA4Q9UN74 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA4Q9UN74 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHA4Q9UN74 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHA4Q9UN74 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHA4Q9UN74 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.64■■□□□ 1.38
PCDHA4Q9UN74 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDHA4Q9UN74 FAM21FP-204ENST00000608637 956 ntBASIC23.64■■□□□ 1.37
PCDHA4Q9UN74 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDHA4Q9UN74 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.64■■□□□ 1.37
PCDHA4Q9UN74 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA4Q9UN74 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
PCDHA4Q9UN74 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA4Q9UN74 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHA4Q9UN74 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 AC026185.1-201ENST00000445748 174 ntBASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHA4Q9UN74 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 CYP2T1P-201ENST00000432607 1285 ntBASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 AC005181.1-201ENST00000604782 1256 ntBASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHA4Q9UN74 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
PCDHA4Q9UN74 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDHA4Q9UN74 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PCDHA4Q9UN74 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHA4Q9UN74 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
PCDHA4Q9UN74 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA4Q9UN74 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms