Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRIT1Q9P2V4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRIT1Q9P2V4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRIT1Q9P2V4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.04■□□□□ 0.8
LRIT1Q9P2V4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.04■□□□□ 0.8
LRIT1Q9P2V4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.04■□□□□ 0.8
LRIT1Q9P2V4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LRIT1Q9P2V4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRIT1Q9P2V4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRIT1Q9P2V4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
LRIT1Q9P2V4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRIT1Q9P2V4 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 AC116050.2-201ENST00000612102 1779 ntBASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 UNC93B5-201ENST00000530315 699 ntBASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 AC006058.3-201ENST00000606217 1069 ntBASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRIT1Q9P2V4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRIT1Q9P2V4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.02■□□□□ 0.8
LRIT1Q9P2V4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRIT1Q9P2V4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRIT1Q9P2V4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
LRIT1Q9P2V4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
LRIT1Q9P2V4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRIT1Q9P2V4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LRIT1Q9P2V4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRIT1Q9P2V4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRIT1Q9P2V4 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.02■□□□□ 0.8
LRIT1Q9P2V4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRIT1Q9P2V4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LRIT1Q9P2V4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRIT1Q9P2V4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LRIT1Q9P2V4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.02■□□□□ 0.79
LRIT1Q9P2V4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LRIT1Q9P2V4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 AC026366.1-201ENST00000488803 879 ntBASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRIT1Q9P2V4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LRIT1Q9P2V4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRIT1Q9P2V4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20■□□□□ 0.79
LRIT1Q9P2V4 AC079834.2-201ENST00000609776 1949 ntBASIC20■□□□□ 0.79
LRIT1Q9P2V4 CYP21A1P-202ENST00000354927 1481 ntBASIC20■□□□□ 0.79
LRIT1Q9P2V4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20■□□□□ 0.79
LRIT1Q9P2V4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LRIT1Q9P2V4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRIT1Q9P2V4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20■□□□□ 0.79
LRIT1Q9P2V4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LRIT1Q9P2V4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20■□□□□ 0.79
LRIT1Q9P2V4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20■□□□□ 0.79
LRIT1Q9P2V4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20■□□□□ 0.79
LRIT1Q9P2V4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRIT1Q9P2V4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20■□□□□ 0.79
LRIT1Q9P2V4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRIT1Q9P2V4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20■□□□□ 0.79
LRIT1Q9P2V4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRIT1Q9P2V4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
LRIT1Q9P2V4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 AC128676.1-201ENST00000454392 318 ntBASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 AP003097.1-201ENST00000530657 1135 ntBASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 AC060766.5-201ENST00000590539 871 ntBASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 HLA-B-256ENST00000639848 1089 ntBASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms