Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 AC096631.2-201ENST00000436136 790 ntBASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.73■□□□□ 0.91
CPSF2Q9P2I0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 PLK5-205ENST00000642079 1969 ntBASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 AC099791.1-201ENST00000416440 715 ntBASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.72■□□□□ 0.91
CPSF2Q9P2I0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 AL158211.5-201ENST00000623583 2518 ntBASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 PBX2P1-201ENST00000493219 1291 ntBASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CPSF2Q9P2I0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
CPSF2Q9P2I0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.7■□□□□ 0.91
CPSF2Q9P2I0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CPSF2Q9P2I0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
CPSF2Q9P2I0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CPSF2Q9P2I0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPSF2Q9P2I0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.7■□□□□ 0.9
CPSF2Q9P2I0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CPSF2Q9P2I0 AC026471.1-201ENST00000564629 3026 ntBASIC20.7■□□□□ 0.9
CPSF2Q9P2I0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPSF2Q9P2I0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.7■□□□□ 0.9
CPSF2Q9P2I0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPSF2Q9P2I0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPSF2Q9P2I0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CPSF2Q9P2I0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.7■□□□□ 0.9
CPSF2Q9P2I0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPSF2Q9P2I0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPSF2Q9P2I0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPSF2Q9P2I0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 AC006128.1-201ENST00000624704 1661 ntBASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 TSPY26P-201ENST00000476365 1326 ntBASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms