Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 AC142381.4-202ENST00000563973 229 ntBASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 PKD1P6-201ENST00000343738 4769 ntBASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 AC060766.5-201ENST00000590539 871 ntBASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 HLA-B-256ENST00000639848 1089 ntBASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NLGN3Q9NZ94 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NLGN3Q9NZ94 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NLGN3Q9NZ94 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NLGN3Q9NZ94 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.24■□□□□ 0.83
NLGN3Q9NZ94 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NLGN3Q9NZ94 AL158047.1-201ENST00000445918 881 ntBASIC20.24■□□□□ 0.83
NLGN3Q9NZ94 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.24■□□□□ 0.83
NLGN3Q9NZ94 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.24■□□□□ 0.83
NLGN3Q9NZ94 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.24■□□□□ 0.83
NLGN3Q9NZ94 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NLGN3Q9NZ94 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
NLGN3Q9NZ94 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NLGN3Q9NZ94 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NLGN3Q9NZ94 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NLGN3Q9NZ94 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NLGN3Q9NZ94 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NLGN3Q9NZ94 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NLGN3Q9NZ94 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NLGN3Q9NZ94 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
NLGN3Q9NZ94 AC007322.3-201ENST00000426526 701 ntBASIC20.23■□□□□ 0.83
NLGN3Q9NZ94 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.23■□□□□ 0.83
NLGN3Q9NZ94 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
NLGN3Q9NZ94 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.23■□□□□ 0.83
NLGN3Q9NZ94 AC073648.6-201ENST00000641589 218 ntBASIC20.23■□□□□ 0.83
NLGN3Q9NZ94 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
NLGN3Q9NZ94 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
NLGN3Q9NZ94 FAM99A-202ENST00000538190 1989 ntBASIC20.23■□□□□ 0.83
NLGN3Q9NZ94 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NLGN3Q9NZ94 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NLGN3Q9NZ94 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.21■□□□□ 0.83
NLGN3Q9NZ94 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NLGN3Q9NZ94 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NLGN3Q9NZ94 KRT18P68-201ENST00000392293 1000 ntBASIC20.21■□□□□ 0.83
NLGN3Q9NZ94 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
NLGN3Q9NZ94 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NLGN3Q9NZ94 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms