Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 AP005212.1-201ENST00000581547 1997 ntBASIC17.15■□□□□ 0.34
LIN7CQ9NUP9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 BX005040.4-201ENST00000637145 1518 ntBASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
LIN7CQ9NUP9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LIN7CQ9NUP9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 AC138932.1-201ENST00000534164 6830 ntBASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 MIR6084-201ENST00000622012 110 ntBASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LIN7CQ9NUP9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 PLK5-205ENST00000642079 1969 ntBASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 YBX1P1-201ENST00000445822 960 ntBASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 AC009237.3-201ENST00000393279 1427 ntBASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIN7CQ9NUP9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 AC123595.1-201ENST00000440769 1046 ntBASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 AC092667.1-201ENST00000434301 2586 ntBASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 AC121338.2-201ENST00000622535 1744 ntBASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LIN7CQ9NUP9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms