Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.23□□□□□ -0.13
CDC42SE2Q9NRR3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 AC135279.3-201ENST00000610945 1311 ntBASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 AL162377.1-201ENST00000618844 1793 ntBASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC42SE2Q9NRR3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 PCDHAC2-203ENST00000615316 3011 ntBASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 AP004607.4-201ENST00000530158 1459 ntBASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 AC008764.7-201ENST00000593779 1081 ntBASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 AC053503.5-201ENST00000601508 636 ntBASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42SE2Q9NRR3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CDC42SE2Q9NRR3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.21□□□□□ -0.14
CDC42SE2Q9NRR3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDC42SE2Q9NRR3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDC42SE2Q9NRR3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CDC42SE2Q9NRR3 AL512408.1-201ENST00000569378 2000 ntBASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 TSPY26P-201ENST00000476365 1326 ntBASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 EEF1DP3-203ENST00000566025 782 ntBASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42SE2Q9NRR3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDC42SE2Q9NRR3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CDC42SE2Q9NRR3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms