Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 AL136162.1-201ENST00000607711 1078 ntBASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 AC135279.3-201ENST00000610945 1311 ntBASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB16Q9NRJ7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 AC096631.2-201ENST00000436136 790 ntBASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB16Q9NRJ7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 AC024257.2-201ENST00000549699 147 ntBASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB16Q9NRJ7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.45
PCDHB16Q9NRJ7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB16Q9NRJ7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
PCDHB16Q9NRJ7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.83■□□□□ 0.45
PCDHB16Q9NRJ7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB16Q9NRJ7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHB16Q9NRJ7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB16Q9NRJ7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHB16Q9NRJ7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHB16Q9NRJ7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHB16Q9NRJ7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms