Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHD8Q9HCK8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.54■□□□□ 0.72
CHD8Q9HCK8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD8Q9HCK8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.54■□□□□ 0.72
CHD8Q9HCK8 HCG4P8-203ENST00000443049 980 ntBASIC19.53■□□□□ 0.72
CHD8Q9HCK8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.53■□□□□ 0.72
CHD8Q9HCK8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD8Q9HCK8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD8Q9HCK8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHD8Q9HCK8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD8Q9HCK8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD8Q9HCK8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD8Q9HCK8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHD8Q9HCK8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.53■□□□□ 0.72
CHD8Q9HCK8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.53■□□□□ 0.72
CHD8Q9HCK8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.53■□□□□ 0.72
CHD8Q9HCK8 AC061975.6-201ENST00000579045 1553 ntBASIC19.53■□□□□ 0.72
CHD8Q9HCK8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHD8Q9HCK8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHD8Q9HCK8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD8Q9HCK8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.52■□□□□ 0.72
CHD8Q9HCK8 KRT18P68-201ENST00000392293 1000 ntBASIC19.52■□□□□ 0.72
CHD8Q9HCK8 AL031133.1-201ENST00000406807 723 ntBASIC19.52■□□□□ 0.72
CHD8Q9HCK8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD8Q9HCK8 AC022616.7-201ENST00000525383 220 ntBASIC19.52■□□□□ 0.72
CHD8Q9HCK8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD8Q9HCK8 DUSP8P4-201ENST00000399538 1761 ntBASIC19.52■□□□□ 0.72
CHD8Q9HCK8 AC027702.1-201ENST00000563810 1770 ntBASIC19.52■□□□□ 0.72
CHD8Q9HCK8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD8Q9HCK8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.52■□□□□ 0.72
CHD8Q9HCK8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD8Q9HCK8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD8Q9HCK8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD8Q9HCK8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD8Q9HCK8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.52■□□□□ 0.72
CHD8Q9HCK8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
CHD8Q9HCK8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.52■□□□□ 0.71
CHD8Q9HCK8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHD8Q9HCK8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD8Q9HCK8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.51■□□□□ 0.71
CHD8Q9HCK8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD8Q9HCK8 AC063952.2-201ENST00000498792 1227 ntBASIC19.51■□□□□ 0.71
CHD8Q9HCK8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD8Q9HCK8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD8Q9HCK8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.51■□□□□ 0.71
CHD8Q9HCK8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHD8Q9HCK8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.51■□□□□ 0.71
CHD8Q9HCK8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.51■□□□□ 0.71
CHD8Q9HCK8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHD8Q9HCK8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD8Q9HCK8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.51■□□□□ 0.71
CHD8Q9HCK8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 AP000347.1-202ENST00000435868 847 ntBASIC19.5■□□□□ 0.71
CHD8Q9HCK8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 FAM21FP-204ENST00000608637 956 ntBASIC19.5■□□□□ 0.71
CHD8Q9HCK8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHD8Q9HCK8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 FITM1-202ENST00000559294 800 ntBASIC19.49■□□□□ 0.71
CHD8Q9HCK8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
CHD8Q9HCK8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD8Q9HCK8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD8Q9HCK8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.48■□□□□ 0.71
CHD8Q9HCK8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHD8Q9HCK8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CHD8Q9HCK8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD8Q9HCK8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.48■□□□□ 0.71
CHD8Q9HCK8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.48■□□□□ 0.71
CHD8Q9HCK8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms