Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 AC016405.3-201ENST00000607710 860 ntBASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
ATP6V0A4Q9HBG4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP6V0A4Q9HBG4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP6V0A4Q9HBG4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP6V0A4Q9HBG4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
ATP6V0A4Q9HBG4 CDV3P1-201ENST00000471403 739 ntBASIC23■■□□□ 1.27
ATP6V0A4Q9HBG4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP6V0A4Q9HBG4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23■■□□□ 1.27
ATP6V0A4Q9HBG4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
ATP6V0A4Q9HBG4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
ATP6V0A4Q9HBG4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A4Q9HBG4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A4Q9HBG4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
ATP6V0A4Q9HBG4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.99■■□□□ 1.27
ATP6V0A4Q9HBG4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A4Q9HBG4 RARRES2P4-201ENST00000514074 484 ntBASIC22.99■■□□□ 1.27
ATP6V0A4Q9HBG4 MIR4758-201ENST00000577688 71 ntBASIC22.99■■□□□ 1.27
ATP6V0A4Q9HBG4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.99■■□□□ 1.27
ATP6V0A4Q9HBG4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.99■■□□□ 1.27
ATP6V0A4Q9HBG4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A4Q9HBG4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.99■■□□□ 1.27
ATP6V0A4Q9HBG4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A4Q9HBG4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A4Q9HBG4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP6V0A4Q9HBG4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 FAM21FP-204ENST00000608637 956 ntBASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 MKRN4P-201ENST00000444706 1521 ntBASIC22.98■■□□□ 1.27
ATP6V0A4Q9HBG4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATP6V0A4Q9HBG4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ATP6V0A4Q9HBG4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATP6V0A4Q9HBG4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATP6V0A4Q9HBG4 AC093787.1-201ENST00000450396 207 ntBASIC22.97■■□□□ 1.27
ATP6V0A4Q9HBG4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.97■■□□□ 1.27
ATP6V0A4Q9HBG4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.97■■□□□ 1.27
ATP6V0A4Q9HBG4 AC098934.4-201ENST00000564127 592 ntBASIC22.97■■□□□ 1.27
ATP6V0A4Q9HBG4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATP6V0A4Q9HBG4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATP6V0A4Q9HBG4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 AC007322.3-201ENST00000426526 701 ntBASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.96■■□□□ 1.27
ATP6V0A4Q9HBG4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.27
ATP6V0A4Q9HBG4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ATP6V0A4Q9HBG4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ATP6V0A4Q9HBG4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ATP6V0A4Q9HBG4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.95■■□□□ 1.26
ATP6V0A4Q9HBG4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ATP6V0A4Q9HBG4 MIPEPP3-201ENST00000412105 444 ntBASIC22.95■■□□□ 1.26
ATP6V0A4Q9HBG4 AL512625.2-201ENST00000417533 625 ntBASIC22.95■■□□□ 1.26
ATP6V0A4Q9HBG4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms