Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 AC007322.4-201ENST00000509611 723 ntBASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 AC008694.1-202ENST00000636953 945 ntBASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 AP004607.7-201ENST00000527152 1677 ntBASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 RNF165-205ENST00000588679 2904 ntBASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.37■□□□□ 0.85
POLR1BQ9H9Y6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 AC005229.4-201ENST00000610085 2198 ntBASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 PRORSD1P-201ENST00000295112 541 ntBASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
POLR1BQ9H9Y6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 AC092118.2-201ENST00000613495 667 ntBASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 AC080038.3-201ENST00000623346 1952 ntBASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
POLR1BQ9H9Y6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 AC069236.1-201ENST00000604339 616 ntBASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 FAM99A-202ENST00000538190 1989 ntBASIC20.34■□□□□ 0.85
POLR1BQ9H9Y6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
POLR1BQ9H9Y6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
POLR1BQ9H9Y6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
POLR1BQ9H9Y6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
POLR1BQ9H9Y6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
POLR1BQ9H9Y6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
POLR1BQ9H9Y6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.33■□□□□ 0.85
POLR1BQ9H9Y6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.33■□□□□ 0.85
POLR1BQ9H9Y6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
POLR1BQ9H9Y6 AL512625.2-201ENST00000417533 625 ntBASIC20.33■□□□□ 0.85
POLR1BQ9H9Y6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.33■□□□□ 0.85
POLR1BQ9H9Y6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
POLR1BQ9H9Y6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
POLR1BQ9H9Y6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
POLR1BQ9H9Y6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
POLR1BQ9H9Y6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
POLR1BQ9H9Y6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.33■□□□□ 0.84
POLR1BQ9H9Y6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1BQ9H9Y6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms