Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.77■□□□□ 0.92
CLPBQ9H078 AC005229.4-201ENST00000610085 2198 ntBASIC20.77■□□□□ 0.92
CLPBQ9H078 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CLPBQ9H078 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLPBQ9H078 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLPBQ9H078 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
CLPBQ9H078 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLPBQ9H078 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CLPBQ9H078 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLPBQ9H078 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.76■□□□□ 0.91
CLPBQ9H078 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLPBQ9H078 POU5F1P4-201ENST00000413175 1085 ntBASIC20.76■□□□□ 0.91
CLPBQ9H078 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLPBQ9H078 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.76■□□□□ 0.91
CLPBQ9H078 TERF1P5-201ENST00000477545 1207 ntBASIC20.76■□□□□ 0.91
CLPBQ9H078 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.76■□□□□ 0.91
CLPBQ9H078 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLPBQ9H078 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLPBQ9H078 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLPBQ9H078 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLPBQ9H078 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CLPBQ9H078 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.76■□□□□ 0.91
CLPBQ9H078 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLPBQ9H078 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPBQ9H078 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPBQ9H078 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
CLPBQ9H078 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPBQ9H078 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPBQ9H078 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.75■□□□□ 0.91
CLPBQ9H078 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.75■□□□□ 0.91
CLPBQ9H078 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.75■□□□□ 0.91
CLPBQ9H078 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CLPBQ9H078 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPBQ9H078 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CLPBQ9H078 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPBQ9H078 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLPBQ9H078 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPBQ9H078 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.75■□□□□ 0.91
CLPBQ9H078 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLPBQ9H078 AC061975.6-201ENST00000579045 1553 ntBASIC20.75■□□□□ 0.91
CLPBQ9H078 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLPBQ9H078 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPBQ9H078 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLPBQ9H078 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLPBQ9H078 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.74■□□□□ 0.91
CLPBQ9H078 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.74■□□□□ 0.91
CLPBQ9H078 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.74■□□□□ 0.91
CLPBQ9H078 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.74■□□□□ 0.91
CLPBQ9H078 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLPBQ9H078 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLPBQ9H078 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CLPBQ9H078 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.74■□□□□ 0.91
CLPBQ9H078 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.74■□□□□ 0.91
CLPBQ9H078 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CLPBQ9H078 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.74■□□□□ 0.91
CLPBQ9H078 AL138781.1-201ENST00000566567 1274 ntBASIC20.74■□□□□ 0.91
CLPBQ9H078 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.74■□□□□ 0.91
CLPBQ9H078 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLPBQ9H078 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLPBQ9H078 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
CLPBQ9H078 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLPBQ9H078 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.73■□□□□ 0.91
CLPBQ9H078 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.73■□□□□ 0.91
CLPBQ9H078 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.73■□□□□ 0.91
CLPBQ9H078 AC120498.10-201ENST00000621827 505 ntBASIC20.73■□□□□ 0.91
CLPBQ9H078 AC013268.1-206ENST00000638368 961 ntBASIC20.73■□□□□ 0.91
CLPBQ9H078 AC112229.1-201ENST00000639295 961 ntBASIC20.73■□□□□ 0.91
CLPBQ9H078 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.73■□□□□ 0.91
CLPBQ9H078 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPBQ9H078 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPBQ9H078 AL049796.1-201ENST00000565336 1766 ntBASIC20.72■□□□□ 0.91
CLPBQ9H078 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.72■□□□□ 0.91
CLPBQ9H078 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPBQ9H078 AC068338.2-201ENST00000563278 1430 ntBASIC20.72■□□□□ 0.91
CLPBQ9H078 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.72■□□□□ 0.91
CLPBQ9H078 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.72■□□□□ 0.91
CLPBQ9H078 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.72■□□□□ 0.91
CLPBQ9H078 AF201337.1-201ENST00000520239 748 ntBASIC20.72■□□□□ 0.91
CLPBQ9H078 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.72■□□□□ 0.91
CLPBQ9H078 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CLPBQ9H078 AC105036.2-201ENST00000569468 176 ntBASIC20.72■□□□□ 0.91
CLPBQ9H078 AC133552.2-202ENST00000575694 574 ntBASIC20.72■□□□□ 0.91
CLPBQ9H078 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CLPBQ9H078 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.72■□□□□ 0.91
CLPBQ9H078 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CLPBQ9H078 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLPBQ9H078 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPBQ9H078 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLPBQ9H078 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.72■□□□□ 0.91
CLPBQ9H078 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CLPBQ9H078 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CLPBQ9H078 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.72■□□□□ 0.91
CLPBQ9H078 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPBQ9H078 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPBQ9H078 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.71■□□□□ 0.91
CLPBQ9H078 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLPBQ9H078 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPBQ9H078 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLPBQ9H078 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CLPBQ9H078 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms