Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AL049870.2-201ENST00000554389 693 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC012417.1-201ENST00000582307 1039 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 THA1P-201ENST00000590384 1145 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 KC877982.1-201ENST00000602313 470 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC013444.2-201ENST00000603317 787 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AL137798.1-201ENST00000607700 339 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC093388.1-201ENST00000609166 430 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC109347.2-201ENST00000610220 349 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC026367.2-201ENST00000610630 553 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC079395.3-201ENST00000615161 484 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AL158062.1-201ENST00000619632 745 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 UBXN8-209ENST00000620074 1058 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AL356490.1-201ENST00000623079 479 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC090772.4-201ENST00000623599 362 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 TP73-AS1-207ENST00000624167 988 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AL353608.4-201ENST00000624487 1188 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AC080188.3-201ENST00000624842 748 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AL121594.5-201ENST00000631724 573 ntBASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 ODF2L-213ENST00000478286 1650 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP4-4Q9BYR3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 AC005832.2-201ENST00000538921 1430 ntBASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 PFDN1-201ENST00000261813 1352 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 GTF2B-201ENST00000370500 1351 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 FO082842.1-201ENST00000423552 1370 ntBASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 RNF212B-202ENST00000399910 1670 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 RPL26L1-201ENST00000265100 722 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 SNORA72.3-201ENST00000365074 132 ntBASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 AMZ2P2-201ENST00000406819 1057 ntBASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 AL353626.3-201ENST00000413399 657 ntBASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 VN1R108P-201ENST00000431580 830 ntBASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 NDUFA5P10-201ENST00000432147 357 ntBASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 CETN4P-201ENST00000432407 469 ntBASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 HSFY7P-201ENST00000432672 318 ntBASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 MTND3P21-201ENST00000433774 331 ntBASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 HSFY8P-201ENST00000437934 318 ntBASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP4-4Q9BYR3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms