Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.82■□□□□ 0.76
CNTNAP3BQ96NU0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3BQ96NU0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CNTNAP3BQ96NU0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP3BQ96NU0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CNTNAP3BQ96NU0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP3BQ96NU0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP3BQ96NU0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP3BQ96NU0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP3BQ96NU0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.81■□□□□ 0.76
CNTNAP3BQ96NU0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.81■□□□□ 0.76
CNTNAP3BQ96NU0 AL031963.3-201ENST00000606441 850 ntBASIC19.81■□□□□ 0.76
CNTNAP3BQ96NU0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.81■□□□□ 0.76
CNTNAP3BQ96NU0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP3BQ96NU0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.81■□□□□ 0.76
CNTNAP3BQ96NU0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP3BQ96NU0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.8■□□□□ 0.76
CNTNAP3BQ96NU0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 AL589743.5-201ENST00000616611 1050 ntBASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.79■□□□□ 0.76
CNTNAP3BQ96NU0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNTNAP3BQ96NU0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNTNAP3BQ96NU0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.78■□□□□ 0.76
CNTNAP3BQ96NU0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNTNAP3BQ96NU0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNTNAP3BQ96NU0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.78■□□□□ 0.76
CNTNAP3BQ96NU0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.78■□□□□ 0.76
CNTNAP3BQ96NU0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.78■□□□□ 0.76
CNTNAP3BQ96NU0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.78■□□□□ 0.76
CNTNAP3BQ96NU0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.78■□□□□ 0.76
CNTNAP3BQ96NU0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.78■□□□□ 0.76
CNTNAP3BQ96NU0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNTNAP3BQ96NU0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 KRT18P22-201ENST00000402024 1347 ntBASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 AC008175.2-201ENST00000612840 297 ntBASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CNTNAP3BQ96NU0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CNTNAP3BQ96NU0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CNTNAP3BQ96NU0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNTNAP3BQ96NU0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms