Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 IGHV3-19-201ENST00000521488 291 ntBASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 AC008764.7-201ENST00000593779 1081 ntBASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 AC106739.1-201ENST00000617035 715 ntBASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SLC47A1Q96FL8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 SMUG1P1-201ENST00000590640 811 ntBASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC47A1Q96FL8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 EDA-201ENST00000338901 1233 ntBASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 AC027682.1-201ENST00000562846 899 ntBASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC47A1Q96FL8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 AC099791.1-201ENST00000416440 715 ntBASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC47A1Q96FL8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms