Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 AL354811.1-201ENST00000610286 706 ntBASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 AC087239.1-201ENST00000622671 572 ntBASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 AC003102.1-202ENST00000563394 1796 ntBASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40AQ8WXH6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40AQ8WXH6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 PLK5-205ENST00000642079 1969 ntBASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 AC012414.1-201ENST00000556676 535 ntBASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB40AQ8WXH6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 AC087623.3-201ENST00000607047 1098 ntBASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 RNF165-205ENST00000588679 2904 ntBASIC18.09■□□□□ 0.49
RAB40AQ8WXH6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40AQ8WXH6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
RAB40AQ8WXH6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40AQ8WXH6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40AQ8WXH6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.08■□□□□ 0.49
RAB40AQ8WXH6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40AQ8WXH6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40AQ8WXH6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40AQ8WXH6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40AQ8WXH6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.08■□□□□ 0.48
RAB40AQ8WXH6 YBX1P1-201ENST00000445822 960 ntBASIC18.08■□□□□ 0.48
RAB40AQ8WXH6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40AQ8WXH6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.08■□□□□ 0.48
RAB40AQ8WXH6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40AQ8WXH6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40AQ8WXH6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.08■□□□□ 0.48
RAB40AQ8WXH6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40AQ8WXH6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RAB40AQ8WXH6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.08■□□□□ 0.48
RAB40AQ8WXH6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.08■□□□□ 0.48
RAB40AQ8WXH6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB40AQ8WXH6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms