Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF139Q8WU17 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF139Q8WU17 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF139Q8WU17 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF139Q8WU17 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF139Q8WU17 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF139Q8WU17 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF139Q8WU17 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
RNF139Q8WU17 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.71■■□□□ 1.07
RNF139Q8WU17 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF139Q8WU17 AC008694.1-202ENST00000636953 945 ntBASIC21.71■■□□□ 1.07
RNF139Q8WU17 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF139Q8WU17 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF139Q8WU17 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RNF139Q8WU17 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF139Q8WU17 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RNF139Q8WU17 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF139Q8WU17 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RNF139Q8WU17 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF139Q8WU17 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF139Q8WU17 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF139Q8WU17 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
RNF139Q8WU17 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF139Q8WU17 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF139Q8WU17 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF139Q8WU17 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
RNF139Q8WU17 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF139Q8WU17 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF139Q8WU17 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF139Q8WU17 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF139Q8WU17 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF139Q8WU17 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.7■■□□□ 1.06
RNF139Q8WU17 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF139Q8WU17 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RNF139Q8WU17 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF139Q8WU17 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.7■■□□□ 1.06
RNF139Q8WU17 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RNF139Q8WU17 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF139Q8WU17 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF139Q8WU17 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF139Q8WU17 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF139Q8WU17 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF139Q8WU17 AC091799.1-201ENST00000422823 811 ntBASIC21.69■■□□□ 1.06
RNF139Q8WU17 CYP2T1P-201ENST00000432607 1285 ntBASIC21.69■■□□□ 1.06
RNF139Q8WU17 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF139Q8WU17 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.69■■□□□ 1.06
RNF139Q8WU17 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF139Q8WU17 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF139Q8WU17 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RNF139Q8WU17 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF139Q8WU17 AC069236.1-201ENST00000604339 616 ntBASIC21.69■■□□□ 1.06
RNF139Q8WU17 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
RNF139Q8WU17 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
RNF139Q8WU17 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF139Q8WU17 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF139Q8WU17 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RNF139Q8WU17 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF139Q8WU17 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF139Q8WU17 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.68■■□□□ 1.06
RNF139Q8WU17 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF139Q8WU17 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF139Q8WU17 CDV3P1-201ENST00000471403 739 ntBASIC21.68■■□□□ 1.06
RNF139Q8WU17 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF139Q8WU17 AL162412.1-201ENST00000567129 965 ntBASIC21.68■■□□□ 1.06
RNF139Q8WU17 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF139Q8WU17 AL050303.2-201ENST00000619798 666 ntBASIC21.68■■□□□ 1.06
RNF139Q8WU17 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF139Q8WU17 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF139Q8WU17 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RNF139Q8WU17 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF139Q8WU17 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF139Q8WU17 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF139Q8WU17 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF139Q8WU17 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF139Q8WU17 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF139Q8WU17 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF139Q8WU17 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF139Q8WU17 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF139Q8WU17 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RNF139Q8WU17 ID1-201ENST00000376105 1233 ntBASIC21.67■■□□□ 1.06
RNF139Q8WU17 GPX1P1-201ENST00000388829 606 ntBASIC21.67■■□□□ 1.06
RNF139Q8WU17 NCF1B-203ENST00000435988 1254 ntBASIC21.67■■□□□ 1.06
RNF139Q8WU17 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.67■■□□□ 1.06
RNF139Q8WU17 AL121832.2-201ENST00000610979 668 ntBASIC21.67■■□□□ 1.06
RNF139Q8WU17 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.67■■□□□ 1.06
RNF139Q8WU17 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF139Q8WU17 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RNF139Q8WU17 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF139Q8WU17 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RNF139Q8WU17 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF139Q8WU17 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF139Q8WU17 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF139Q8WU17 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF139Q8WU17 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF139Q8WU17 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RNF139Q8WU17 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF139Q8WU17 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF139Q8WU17 AL049796.1-201ENST00000565336 1766 ntBASIC21.66■■□□□ 1.06
RNF139Q8WU17 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF139Q8WU17 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms