Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 EEF1DP3-203ENST00000566025 782 ntBASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.1■□□□□ 0.49
RPS4Y2Q8TD47 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 AC110285.6-201ENST00000617652 491 ntBASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RPS4Y2Q8TD47 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RPS4Y2Q8TD47 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RPS4Y2Q8TD47 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
RPS4Y2Q8TD47 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.08■□□□□ 0.49
RPS4Y2Q8TD47 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.08■□□□□ 0.49
RPS4Y2Q8TD47 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.08■□□□□ 0.49
RPS4Y2Q8TD47 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RPS4Y2Q8TD47 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RPS4Y2Q8TD47 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
RPS4Y2Q8TD47 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.08■□□□□ 0.49
RPS4Y2Q8TD47 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 UNC93B3-201ENST00000308076 687 ntBASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 AC053503.5-201ENST00000601508 636 ntBASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RPS4Y2Q8TD47 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 AC112907.3-201ENST00000577781 2400 ntBASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 AL136162.1-201ENST00000607711 1078 ntBASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.07■□□□□ 0.48
RPS4Y2Q8TD47 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 TCF3P1-201ENST00000423021 1937 ntBASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 AC135279.3-201ENST00000610945 1311 ntBASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RPS4Y2Q8TD47 PBX2P1-201ENST00000493219 1291 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms