Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 AL391422.3-201ENST00000603791 2761 ntBASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCHCR1Q8TD31 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
CCHCR1Q8TD31 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
CCHCR1Q8TD31 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCHCR1Q8TD31 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCHCR1Q8TD31 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCHCR1Q8TD31 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CCHCR1Q8TD31 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CCHCR1Q8TD31 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCHCR1Q8TD31 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
CCHCR1Q8TD31 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CCHCR1Q8TD31 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCHCR1Q8TD31 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 MIR935-201ENST00000401179 91 ntBASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 AC097381.1-201ENST00000429019 1296 ntBASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 TPRG1LP1-201ENST00000598702 760 ntBASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCHCR1Q8TD31 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 AC005224.4-201ENST00000583262 1652 ntBASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 RARRES2P6-201ENST00000567333 442 ntBASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 MIR6821-201ENST00000617625 74 ntBASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.45■■□□□ 1.02
CCHCR1Q8TD31 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCHCR1Q8TD31 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 AC073314.1-201ENST00000568729 2216 ntBASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CCHCR1Q8TD31 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms