Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 AL049597.2-201ENST00000565575 961 ntBASIC14.12□□□□□ -0.15
ALMS1Q8TCU4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 AC005829.2-201ENST00000571422 1056 ntBASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 TERF1P1-201ENST00000311003 1181 ntBASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 AL590326.2-201ENST00000625139 305 ntBASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.11□□□□□ -0.15
ALMS1Q8TCU4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 NTF6B-201ENST00000591913 560 ntBASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ALMS1Q8TCU4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 AC120498.8-201ENST00000614275 531 ntBASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 REXO1L10P-201ENST00000615707 1290 ntBASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 AC020928.2-201ENST00000588717 2197 ntBASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 AP000525.1-201ENST00000608286 694 ntBASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.09□□□□□ -0.15
ALMS1Q8TCU4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ALMS1Q8TCU4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.08□□□□□ -0.15
ALMS1Q8TCU4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.08□□□□□ -0.15
ALMS1Q8TCU4 AC073508.3-201ENST00000619697 1419 ntBASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 AC087742.1-201ENST00000575880 1738 ntBASIC14.08□□□□□ -0.16
ALMS1Q8TCU4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms