Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHKBP1Q8TBC3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.76■■□□□ 1.07
SHKBP1Q8TBC3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SHKBP1Q8TBC3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.76■■□□□ 1.07
SHKBP1Q8TBC3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SHKBP1Q8TBC3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHKBP1Q8TBC3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 CDV3P1-201ENST00000471403 739 ntBASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHKBP1Q8TBC3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 AC093827.2-201ENST00000512654 315 ntBASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 CYP2T3P-201ENST00000601990 817 ntBASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHKBP1Q8TBC3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 AC100791.3-201ENST00000617619 330 ntBASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SHKBP1Q8TBC3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHKBP1Q8TBC3 AC098590.1-201ENST00000468126 897 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms