Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 AC023824.1-201ENST00000562945 2975 ntBASIC13.11□□□□□ -0.31
SVIPQ8NHG7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SVIPQ8NHG7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 BCL2-203ENST00000589955 5011 ntBASIC13.1□□□□□ -0.31
SVIPQ8NHG7 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SVIPQ8NHG7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 FAM99A-202ENST00000538190 1989 ntBASIC13.09□□□□□ -0.31
SVIPQ8NHG7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SVIPQ8NHG7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SVIPQ8NHG7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SVIPQ8NHG7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 AC106886.4-201ENST00000623557 2502 ntBASIC13.07□□□□□ -0.32
SVIPQ8NHG7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms