Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C11orf42Q8N5U0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 MFSD11-216ENST00000590393 1141 ntBASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 AC120498.10-201ENST00000621827 505 ntBASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
C11orf42Q8N5U0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 AC004911.1-201ENST00000416316 871 ntBASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.15■□□□□ 0.34
C11orf42Q8N5U0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.14■□□□□ 0.34
C11orf42Q8N5U0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 AC011767.1-201ENST00000617410 1153 ntBASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.14■□□□□ 0.33
C11orf42Q8N5U0 FEM1AP4-201ENST00000443167 1987 ntBASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 DUX4L16-201ENST00000555130 1264 ntBASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 BID-214ENST00000617586 542 ntTSL 5 BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 RARRES2P11-201ENST00000635158 484 ntBASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms