Protein–RNA interactions for Protein: Q8N309

LRRC43, Leucine-rich repeat-containing protein 43, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43Q8N309 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC43Q8N309 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC43Q8N309 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC43Q8N309 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRC43Q8N309 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRC43Q8N309 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
LRRC43Q8N309 AC008403.3-201ENST00000598924 454 ntBASIC22.32■■□□□ 1.16
LRRC43Q8N309 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.32■■□□□ 1.16
LRRC43Q8N309 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC43Q8N309 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC43Q8N309 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC43Q8N309 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.31■■□□□ 1.16
LRRC43Q8N309 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC43Q8N309 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC43Q8N309 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC43Q8N309 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.31■■□□□ 1.16
LRRC43Q8N309 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.31■■□□□ 1.16
LRRC43Q8N309 UNC93B4-201ENST00000505679 747 ntBASIC22.31■■□□□ 1.16
LRRC43Q8N309 PNMA6B-201ENST00000538162 1200 ntBASIC22.31■■□□□ 1.16
LRRC43Q8N309 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
LRRC43Q8N309 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC43Q8N309 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.31■■□□□ 1.16
LRRC43Q8N309 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.31■■□□□ 1.16
LRRC43Q8N309 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC43Q8N309 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC43Q8N309 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC43Q8N309 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.31■■□□□ 1.16
LRRC43Q8N309 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.31■■□□□ 1.16
LRRC43Q8N309 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.3■■□□□ 1.16
LRRC43Q8N309 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC43Q8N309 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC43Q8N309 CYP21A1P-202ENST00000354927 1481 ntBASIC22.3■■□□□ 1.16
LRRC43Q8N309 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.3■■□□□ 1.16
LRRC43Q8N309 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC43Q8N309 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC43Q8N309 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC43Q8N309 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.3■■□□□ 1.16
LRRC43Q8N309 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
LRRC43Q8N309 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC43Q8N309 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.3■■□□□ 1.16
LRRC43Q8N309 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.3■■□□□ 1.16
LRRC43Q8N309 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
LRRC43Q8N309 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC43Q8N309 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC43Q8N309 AC092368.3-202ENST00000574180 1591 ntBASIC22.29■■□□□ 1.16
LRRC43Q8N309 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC43Q8N309 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC43Q8N309 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC43Q8N309 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC43Q8N309 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.29■■□□□ 1.16
LRRC43Q8N309 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.29■■□□□ 1.16
LRRC43Q8N309 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
LRRC43Q8N309 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC43Q8N309 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC43Q8N309 C9orf163-202ENST00000624034 2573 ntBASIC22.29■■□□□ 1.16
LRRC43Q8N309 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC43Q8N309 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
LRRC43Q8N309 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
LRRC43Q8N309 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.29■■□□□ 1.16
LRRC43Q8N309 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.28■■□□□ 1.16
LRRC43Q8N309 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC43Q8N309 RPS2P4-201ENST00000476944 856 ntBASIC22.28■■□□□ 1.16
LRRC43Q8N309 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC43Q8N309 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC43Q8N309 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.28■■□□□ 1.16
LRRC43Q8N309 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC43Q8N309 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC43Q8N309 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.28■■□□□ 1.16
LRRC43Q8N309 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
LRRC43Q8N309 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC43Q8N309 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.27■■□□□ 1.16
LRRC43Q8N309 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
LRRC43Q8N309 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.27■■□□□ 1.16
LRRC43Q8N309 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.27■■□□□ 1.16
LRRC43Q8N309 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.27■■□□□ 1.16
LRRC43Q8N309 AC105020.6-201ENST00000621523 1217 ntBASIC22.27■■□□□ 1.16
LRRC43Q8N309 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LRRC43Q8N309 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
LRRC43Q8N309 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
LRRC43Q8N309 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRC43Q8N309 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LRRC43Q8N309 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRC43Q8N309 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRC43Q8N309 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.26■■□□□ 1.15
LRRC43Q8N309 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRC43Q8N309 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.26■■□□□ 1.15
LRRC43Q8N309 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
LRRC43Q8N309 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.26■■□□□ 1.15
LRRC43Q8N309 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
LRRC43Q8N309 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.26■■□□□ 1.15
LRRC43Q8N309 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.26■■□□□ 1.15
LRRC43Q8N309 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.26■■□□□ 1.15
LRRC43Q8N309 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
LRRC43Q8N309 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.26■■□□□ 1.15
LRRC43Q8N309 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.26■■□□□ 1.15
LRRC43Q8N309 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.26■■□□□ 1.15
LRRC43Q8N309 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRC43Q8N309 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRC43Q8N309 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LRRC43Q8N309 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms