Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC31.02■■■□□ 2.56
ABCA6Q8N139 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC31.02■■■□□ 2.56
ABCA6Q8N139 CD177P1-201ENST00000606252 935 ntBASIC31.02■■■□□ 2.56
ABCA6Q8N139 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC31.02■■■□□ 2.56
ABCA6Q8N139 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC31.01■■■□□ 2.56
ABCA6Q8N139 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
ABCA6Q8N139 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
ABCA6Q8N139 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
ABCA6Q8N139 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC31.01■■■□□ 2.55
ABCA6Q8N139 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
ABCA6Q8N139 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC31.01■■■□□ 2.55
ABCA6Q8N139 GGT1-206ENST00000404223 952 ntTSL 2 BASIC31.01■■■□□ 2.55
ABCA6Q8N139 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
ABCA6Q8N139 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC31.01■■■□□ 2.55
ABCA6Q8N139 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC31.01■■■□□ 2.55
ABCA6Q8N139 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
ABCA6Q8N139 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
ABCA6Q8N139 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
ABCA6Q8N139 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC31■■■□□ 2.55
ABCA6Q8N139 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC31■■■□□ 2.55
ABCA6Q8N139 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC31■■■□□ 2.55
ABCA6Q8N139 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC31■■■□□ 2.55
ABCA6Q8N139 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC31■■■□□ 2.55
ABCA6Q8N139 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ABCA6Q8N139 TMPOP1-202ENST00000424642 1267 ntBASIC31■■■□□ 2.55
ABCA6Q8N139 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC31■■■□□ 2.55
ABCA6Q8N139 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ABCA6Q8N139 AC110285.5-201ENST00000611501 352 ntBASIC31■■■□□ 2.55
ABCA6Q8N139 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC31■■■□□ 2.55
ABCA6Q8N139 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
ABCA6Q8N139 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
ABCA6Q8N139 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
ABCA6Q8N139 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC30.99■■■□□ 2.55
ABCA6Q8N139 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC30.99■■■□□ 2.55
ABCA6Q8N139 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
ABCA6Q8N139 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC30.99■■■□□ 2.55
ABCA6Q8N139 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC30.99■■■□□ 2.55
ABCA6Q8N139 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA6Q8N139 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC30.98■■■□□ 2.55
ABCA6Q8N139 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC30.98■■■□□ 2.55
ABCA6Q8N139 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC30.98■■■□□ 2.55
ABCA6Q8N139 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA6Q8N139 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC30.98■■■□□ 2.55
ABCA6Q8N139 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC30.98■■■□□ 2.55
ABCA6Q8N139 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA6Q8N139 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA6Q8N139 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC30.98■■■□□ 2.55
ABCA6Q8N139 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC30.98■■■□□ 2.55
ABCA6Q8N139 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC30.98■■■□□ 2.55
ABCA6Q8N139 PRKY-204ENST00000533551 1019 ntBASIC30.98■■■□□ 2.55
ABCA6Q8N139 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC30.98■■■□□ 2.55
ABCA6Q8N139 C2orf69P4-201ENST00000565394 541 ntBASIC30.98■■■□□ 2.55
ABCA6Q8N139 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA6Q8N139 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA6Q8N139 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA6Q8N139 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA6Q8N139 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA6Q8N139 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA6Q8N139 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA6Q8N139 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC30.97■■■□□ 2.55
ABCA6Q8N139 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA6Q8N139 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA6Q8N139 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC30.96■■■□□ 2.55
ABCA6Q8N139 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA6Q8N139 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA6Q8N139 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC30.96■■■□□ 2.55
ABCA6Q8N139 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC30.96■■■□□ 2.55
ABCA6Q8N139 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA6Q8N139 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA6Q8N139 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC30.96■■■□□ 2.55
ABCA6Q8N139 AP001412.1-201ENST00000608405 714 ntBASIC30.96■■■□□ 2.55
ABCA6Q8N139 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC30.96■■■□□ 2.55
ABCA6Q8N139 COMT-203ENST00000403184 2217 ntTSL 2 BASIC30.96■■■□□ 2.55
ABCA6Q8N139 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA6Q8N139 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA6Q8N139 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA6Q8N139 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC30.96■■■□□ 2.55
ABCA6Q8N139 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA6Q8N139 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ABCA6Q8N139 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
ABCA6Q8N139 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
ABCA6Q8N139 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC30.95■■■□□ 2.55
ABCA6Q8N139 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
ABCA6Q8N139 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
ABCA6Q8N139 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
ABCA6Q8N139 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
ABCA6Q8N139 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
ABCA6Q8N139 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
ABCA6Q8N139 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
ABCA6Q8N139 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
ABCA6Q8N139 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC30.95■■■□□ 2.54
ABCA6Q8N139 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
ABCA6Q8N139 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
ABCA6Q8N139 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC30.95■■■□□ 2.54
ABCA6Q8N139 AC005829.2-201ENST00000571422 1056 ntBASIC30.95■■■□□ 2.54
ABCA6Q8N139 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC30.95■■■□□ 2.54
ABCA6Q8N139 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
ABCA6Q8N139 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ABCA6Q8N139 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
ABCA6Q8N139 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms