Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 AC116050.2-201ENST00000612102 1779 ntBASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 AC068338.2-201ENST00000563278 1430 ntBASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 PKD1P6-201ENST00000343738 4769 ntBASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 AC007322.4-201ENST00000509611 723 ntBASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.74■■□□□ 1.07
SCUBE3Q8IX30 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
SCUBE3Q8IX30 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCUBE3Q8IX30 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCUBE3Q8IX30 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCUBE3Q8IX30 AC026185.1-201ENST00000445748 174 ntBASIC21.73■■□□□ 1.07
SCUBE3Q8IX30 AC011484.1-201ENST00000377652 1995 ntBASIC21.73■■□□□ 1.07
SCUBE3Q8IX30 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCUBE3Q8IX30 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCUBE3Q8IX30 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.73■■□□□ 1.07
SCUBE3Q8IX30 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SCUBE3Q8IX30 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCUBE3Q8IX30 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.73■■□□□ 1.07
SCUBE3Q8IX30 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SCUBE3Q8IX30 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SCUBE3Q8IX30 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.72■■□□□ 1.07
SCUBE3Q8IX30 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE3Q8IX30 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE3Q8IX30 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
SCUBE3Q8IX30 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE3Q8IX30 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE3Q8IX30 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE3Q8IX30 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.71■■□□□ 1.07
SCUBE3Q8IX30 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.71■■□□□ 1.07
SCUBE3Q8IX30 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE3Q8IX30 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE3Q8IX30 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE3Q8IX30 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE3Q8IX30 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.71■■□□□ 1.07
SCUBE3Q8IX30 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.7■■□□□ 1.07
SCUBE3Q8IX30 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 AC016405.3-201ENST00000607710 860 ntBASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.7■■□□□ 1.06
SCUBE3Q8IX30 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms