Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.25■■□□□ 1.79
COL23A1Q86Y22 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL23A1Q86Y22 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.25■■□□□ 1.79
COL23A1Q86Y22 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL23A1Q86Y22 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL23A1Q86Y22 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL23A1Q86Y22 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL23A1Q86Y22 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL23A1Q86Y22 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL23A1Q86Y22 AC026471.5-201ENST00000615068 467 ntBASIC26.25■■□□□ 1.79
COL23A1Q86Y22 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL23A1Q86Y22 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL23A1Q86Y22 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL23A1Q86Y22 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.24■■□□□ 1.79
COL23A1Q86Y22 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 AP003071.4-201ENST00000562276 1284 ntBASIC26.24■■□□□ 1.79
COL23A1Q86Y22 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 AL590326.2-201ENST00000625139 305 ntBASIC26.24■■□□□ 1.79
COL23A1Q86Y22 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL23A1Q86Y22 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.23■■□□□ 1.79
COL23A1Q86Y22 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC26.23■■□□□ 1.79
COL23A1Q86Y22 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
COL23A1Q86Y22 MMP23A-201ENST00000234610 1017 ntBASIC26.23■■□□□ 1.79
COL23A1Q86Y22 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
COL23A1Q86Y22 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
COL23A1Q86Y22 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC26.23■■□□□ 1.79
COL23A1Q86Y22 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC26.23■■□□□ 1.79
COL23A1Q86Y22 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL23A1Q86Y22 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC26.23■■□□□ 1.79
COL23A1Q86Y22 CABP2-204ENST00000636477 941 ntTSL 5 BASIC26.23■■□□□ 1.79
COL23A1Q86Y22 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC26.23■■□□□ 1.79
COL23A1Q86Y22 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL23A1Q86Y22 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
COL23A1Q86Y22 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL23A1Q86Y22 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL23A1Q86Y22 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL23A1Q86Y22 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL23A1Q86Y22 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL23A1Q86Y22 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.22■■□□□ 1.79
COL23A1Q86Y22 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
COL23A1Q86Y22 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
COL23A1Q86Y22 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.22■■□□□ 1.79
COL23A1Q86Y22 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC26.22■■□□□ 1.79
COL23A1Q86Y22 AC092865.7-201ENST00000641832 219 ntBASIC26.22■■□□□ 1.79
COL23A1Q86Y22 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL23A1Q86Y22 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 TPM1-226ENST00000560959 925 ntTSL 2 BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 AC005829.2-201ENST00000571422 1056 ntBASIC26.21■■□□□ 1.79
COL23A1Q86Y22 GRAP-204ENST00000573099 846 ntTSL 3 BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL23A1Q86Y22 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
COL23A1Q86Y22 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.2■■□□□ 1.79
COL23A1Q86Y22 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
COL23A1Q86Y22 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL23A1Q86Y22 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.2■■□□□ 1.78
COL23A1Q86Y22 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL23A1Q86Y22 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
COL23A1Q86Y22 SAPCD2P4-201ENST00000424595 1171 ntBASIC26.2■■□□□ 1.78
COL23A1Q86Y22 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
COL23A1Q86Y22 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC26.2■■□□□ 1.78
COL23A1Q86Y22 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL23A1Q86Y22 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
COL23A1Q86Y22 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms