Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.79■□□□□ 0.6
HIST3H2AQ7L7L0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HIST3H2AQ7L7L0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H2AQ7L7L0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H2AQ7L7L0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.79■□□□□ 0.6
HIST3H2AQ7L7L0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST3H2AQ7L7L0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 AC061975.6-201ENST00000579045 1553 ntBASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.78■□□□□ 0.6
HIST3H2AQ7L7L0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H2AQ7L7L0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
HIST3H2AQ7L7L0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HIST3H2AQ7L7L0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H2AQ7L7L0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H2AQ7L7L0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H2AQ7L7L0 AC006128.1-201ENST00000624704 1661 ntBASIC18.77■□□□□ 0.6
HIST3H2AQ7L7L0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST3H2AQ7L7L0 AC123595.1-201ENST00000440769 1046 ntBASIC18.77■□□□□ 0.6
HIST3H2AQ7L7L0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST3H2AQ7L7L0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST3H2AQ7L7L0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H2AQ7L7L0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST3H2AQ7L7L0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST3H2AQ7L7L0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.77■□□□□ 0.59
HIST3H2AQ7L7L0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST3H2AQ7L7L0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 AC138907.5-202ENST00000569484 235 ntBASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HIST3H2AQ7L7L0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST3H2AQ7L7L0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
HIST3H2AQ7L7L0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST3H2AQ7L7L0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HIST3H2AQ7L7L0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms