Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RNF20Q5VTR2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RNF20Q5VTR2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RNF20Q5VTR2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
RNF20Q5VTR2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF20Q5VTR2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
RNF20Q5VTR2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF20Q5VTR2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.66■■□□□ 1.54
RNF20Q5VTR2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.66■■□□□ 1.54
RNF20Q5VTR2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
RNF20Q5VTR2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF20Q5VTR2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RNF20Q5VTR2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.66■■□□□ 1.54
RNF20Q5VTR2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF20Q5VTR2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF20Q5VTR2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC24.66■■□□□ 1.54
RNF20Q5VTR2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.66■■□□□ 1.54
RNF20Q5VTR2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 AC243732.1-201ENST00000612648 864 ntBASIC24.65■■□□□ 1.54
RNF20Q5VTR2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF20Q5VTR2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF20Q5VTR2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.64■■□□□ 1.54
RNF20Q5VTR2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.64■■□□□ 1.54
RNF20Q5VTR2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF20Q5VTR2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RNF20Q5VTR2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RNF20Q5VTR2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.64■■□□□ 1.54
RNF20Q5VTR2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
RNF20Q5VTR2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.64■■□□□ 1.54
RNF20Q5VTR2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.64■■□□□ 1.53
RNF20Q5VTR2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RNF20Q5VTR2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RNF20Q5VTR2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.64■■□□□ 1.53
RNF20Q5VTR2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
RNF20Q5VTR2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
RNF20Q5VTR2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RNF20Q5VTR2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF20Q5VTR2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.63■■□□□ 1.53
RNF20Q5VTR2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF20Q5VTR2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF20Q5VTR2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF20Q5VTR2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF20Q5VTR2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.63■■□□□ 1.53
RNF20Q5VTR2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.63■■□□□ 1.53
RNF20Q5VTR2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.63■■□□□ 1.53
RNF20Q5VTR2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.63■■□□□ 1.53
RNF20Q5VTR2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
RNF20Q5VTR2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF20Q5VTR2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF20Q5VTR2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF20Q5VTR2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
RNF20Q5VTR2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.62■■□□□ 1.53
RNF20Q5VTR2 RBM17P2-201ENST00000616397 1405 ntBASIC24.62■■□□□ 1.53
RNF20Q5VTR2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RNF20Q5VTR2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF20Q5VTR2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
RNF20Q5VTR2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.62■■□□□ 1.53
RNF20Q5VTR2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.62■■□□□ 1.53
RNF20Q5VTR2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.62■■□□□ 1.53
RNF20Q5VTR2 UBE2DNL-204ENST00000602536 740 ntBASIC24.62■■□□□ 1.53
RNF20Q5VTR2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.62■■□□□ 1.53
RNF20Q5VTR2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RNF20Q5VTR2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.62■■□□□ 1.53
RNF20Q5VTR2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
RNF20Q5VTR2 AC116050.2-201ENST00000612102 1779 ntBASIC24.62■■□□□ 1.53
RNF20Q5VTR2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
RNF20Q5VTR2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF20Q5VTR2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RNF20Q5VTR2 AC007225.1-201ENST00000566331 1836 ntBASIC24.61■■□□□ 1.53
RNF20Q5VTR2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF20Q5VTR2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
RNF20Q5VTR2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.61■■□□□ 1.53
RNF20Q5VTR2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF20Q5VTR2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF20Q5VTR2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.61■■□□□ 1.53
RNF20Q5VTR2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.61■■□□□ 1.53
RNF20Q5VTR2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.61■■□□□ 1.53
RNF20Q5VTR2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.61■■□□□ 1.53
RNF20Q5VTR2 RARRES2P6-201ENST00000567333 442 ntBASIC24.61■■□□□ 1.53
RNF20Q5VTR2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.61■■□□□ 1.53
RNF20Q5VTR2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms