Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ARFGEF3Q5TH69 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARFGEF3Q5TH69 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 AC097658.1-201ENST00000475555 843 ntBASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 AC008687.6-201ENST00000596318 630 ntBASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 FAM21FP-204ENST00000608637 956 ntBASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 MCRIP2P1-201ENST00000394346 511 ntBASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
ARFGEF3Q5TH69 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ARFGEF3Q5TH69 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ARFGEF3Q5TH69 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ARFGEF3Q5TH69 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ARFGEF3Q5TH69 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.58■□□□□ 0.41
ARFGEF3Q5TH69 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ARFGEF3Q5TH69 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ARFGEF3Q5TH69 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ARFGEF3Q5TH69 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.58■□□□□ 0.4
ARFGEF3Q5TH69 ECEL1P1-201ENST00000373592 1742 ntBASIC17.58■□□□□ 0.4
ARFGEF3Q5TH69 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ARFGEF3Q5TH69 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.58■□□□□ 0.4
ARFGEF3Q5TH69 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ARFGEF3Q5TH69 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ARFGEF3Q5TH69 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 AC087633.2-202ENST00000565166 1439 ntBASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.57■□□□□ 0.4
ARFGEF3Q5TH69 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 AC116050.2-201ENST00000612102 1779 ntBASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARFGEF3Q5TH69 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARFGEF3Q5TH69 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.55■□□□□ 0.4
ARFGEF3Q5TH69 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARFGEF3Q5TH69 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARFGEF3Q5TH69 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARFGEF3Q5TH69 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARFGEF3Q5TH69 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.55■□□□□ 0.4
ARFGEF3Q5TH69 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ARFGEF3Q5TH69 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms