Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 AC026310.3-201ENST00000625186 2373 ntBASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 CNN2P6-201ENST00000439038 900 ntBASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 CDCA4P2-201ENST00000441182 718 ntBASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LDLRAP1Q5SW96 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 AL049796.1-201ENST00000565336 1766 ntBASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 AC091799.1-201ENST00000422823 811 ntBASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 AC026185.1-201ENST00000445748 174 ntBASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LDLRAP1Q5SW96 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 AL591742.1-201ENST00000604433 565 ntBASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LDLRAP1Q5SW96 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LDLRAP1Q5SW96 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LDLRAP1Q5SW96 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
LDLRAP1Q5SW96 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
LDLRAP1Q5SW96 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.52■□□□□ 0.88
LDLRAP1Q5SW96 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.52■□□□□ 0.88
LDLRAP1Q5SW96 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.52■□□□□ 0.88
LDLRAP1Q5SW96 AL162412.1-201ENST00000567129 965 ntBASIC20.52■□□□□ 0.88
LDLRAP1Q5SW96 RAP2CP1-201ENST00000605103 478 ntBASIC20.52■□□□□ 0.88
LDLRAP1Q5SW96 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.52■□□□□ 0.88
LDLRAP1Q5SW96 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LDLRAP1Q5SW96 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LDLRAP1Q5SW96 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LDLRAP1Q5SW96 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LDLRAP1Q5SW96 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LDLRAP1Q5SW96 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LDLRAP1Q5SW96 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LDLRAP1Q5SW96 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDLRAP1Q5SW96 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LDLRAP1Q5SW96 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.51■□□□□ 0.87
LDLRAP1Q5SW96 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.51■□□□□ 0.87
LDLRAP1Q5SW96 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.51■□□□□ 0.87
LDLRAP1Q5SW96 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDLRAP1Q5SW96 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.51■□□□□ 0.87
LDLRAP1Q5SW96 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LDLRAP1Q5SW96 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDLRAP1Q5SW96 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LDLRAP1Q5SW96 CDV3P1-201ENST00000471403 739 ntBASIC20.51■□□□□ 0.87
LDLRAP1Q5SW96 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.51■□□□□ 0.87
LDLRAP1Q5SW96 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.51■□□□□ 0.87
LDLRAP1Q5SW96 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.51■□□□□ 0.87
LDLRAP1Q5SW96 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms