Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
VARS2Q5ST30 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
VARS2Q5ST30 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VARS2Q5ST30 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VARS2Q5ST30 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
VARS2Q5ST30 AL117328.2-201ENST00000624617 1940 ntBASIC21.98■■□□□ 1.11
VARS2Q5ST30 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
VARS2Q5ST30 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VARS2Q5ST30 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
VARS2Q5ST30 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VARS2Q5ST30 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VARS2Q5ST30 KRT18P29-201ENST00000397031 1267 ntBASIC21.97■■□□□ 1.11
VARS2Q5ST30 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VARS2Q5ST30 ESRRAP1-201ENST00000400596 1257 ntBASIC21.97■■□□□ 1.11
VARS2Q5ST30 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
VARS2Q5ST30 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.97■■□□□ 1.11
VARS2Q5ST30 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VARS2Q5ST30 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.97■■□□□ 1.11
VARS2Q5ST30 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.97■■□□□ 1.11
VARS2Q5ST30 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VARS2Q5ST30 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VARS2Q5ST30 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
VARS2Q5ST30 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VARS2Q5ST30 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.96■■□□□ 1.11
VARS2Q5ST30 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.96■■□□□ 1.11
VARS2Q5ST30 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VARS2Q5ST30 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VARS2Q5ST30 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
VARS2Q5ST30 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
VARS2Q5ST30 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
VARS2Q5ST30 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.96■■□□□ 1.11
VARS2Q5ST30 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.96■■□□□ 1.11
VARS2Q5ST30 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
VARS2Q5ST30 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VARS2Q5ST30 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VARS2Q5ST30 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
VARS2Q5ST30 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.96■■□□□ 1.11
VARS2Q5ST30 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VARS2Q5ST30 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
VARS2Q5ST30 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
VARS2Q5ST30 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VARS2Q5ST30 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VARS2Q5ST30 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VARS2Q5ST30 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.95■■□□□ 1.1
VARS2Q5ST30 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VARS2Q5ST30 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.95■■□□□ 1.1
VARS2Q5ST30 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VARS2Q5ST30 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VARS2Q5ST30 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VARS2Q5ST30 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.95■■□□□ 1.1
VARS2Q5ST30 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VARS2Q5ST30 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.95■■□□□ 1.1
VARS2Q5ST30 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
VARS2Q5ST30 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VARS2Q5ST30 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.95■■□□□ 1.1
VARS2Q5ST30 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VARS2Q5ST30 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.95■■□□□ 1.1
VARS2Q5ST30 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.95■■□□□ 1.1
VARS2Q5ST30 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VARS2Q5ST30 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VARS2Q5ST30 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VARS2Q5ST30 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
VARS2Q5ST30 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VARS2Q5ST30 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.95■■□□□ 1.1
VARS2Q5ST30 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VARS2Q5ST30 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
VARS2Q5ST30 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.94■■□□□ 1.1
VARS2Q5ST30 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.94■■□□□ 1.1
VARS2Q5ST30 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
VARS2Q5ST30 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
VARS2Q5ST30 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VARS2Q5ST30 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VARS2Q5ST30 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.94■■□□□ 1.1
VARS2Q5ST30 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
VARS2Q5ST30 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
VARS2Q5ST30 PRORSD1P-201ENST00000295112 541 ntBASIC21.94■■□□□ 1.1
VARS2Q5ST30 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.94■■□□□ 1.1
VARS2Q5ST30 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.94■■□□□ 1.1
VARS2Q5ST30 UNC93B5-201ENST00000530315 699 ntBASIC21.94■■□□□ 1.1
VARS2Q5ST30 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.94■■□□□ 1.1
VARS2Q5ST30 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.94■■□□□ 1.1
VARS2Q5ST30 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.94■■□□□ 1.1
VARS2Q5ST30 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VARS2Q5ST30 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.94■■□□□ 1.1
VARS2Q5ST30 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.93■■□□□ 1.1
VARS2Q5ST30 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VARS2Q5ST30 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.93■■□□□ 1.1
VARS2Q5ST30 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
VARS2Q5ST30 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VARS2Q5ST30 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.93■■□□□ 1.1
VARS2Q5ST30 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VARS2Q5ST30 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
VARS2Q5ST30 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VARS2Q5ST30 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VARS2Q5ST30 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
VARS2Q5ST30 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VARS2Q5ST30 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.92■■□□□ 1.1
VARS2Q5ST30 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VARS2Q5ST30 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
VARS2Q5ST30 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms