Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ALFQ53S48 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.29■■□□□ 1
ALFQ53S48 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ALFQ53S48 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.29■■□□□ 1
ALFQ53S48 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ALFQ53S48 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ALFQ53S48 NCF1B-203ENST00000435988 1254 ntBASIC21.29■■□□□ 1
ALFQ53S48 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.29■■□□□ 1
ALFQ53S48 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.29■■□□□ 1
ALFQ53S48 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.29■■□□□ 1
ALFQ53S48 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ALFQ53S48 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.28■■□□□ 1
ALFQ53S48 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.28■■□□□ 1
ALFQ53S48 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ALFQ53S48 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.28■■□□□ 1
ALFQ53S48 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.28■■□□□ 1
ALFQ53S48 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.28■■□□□ 1
ALFQ53S48 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.28■■□□□ 1
ALFQ53S48 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.28■■□□□ 1
ALFQ53S48 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.28■■□□□ 1
ALFQ53S48 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.28■■□□□ 1
ALFQ53S48 AL162412.1-201ENST00000567129 965 ntBASIC21.28■■□□□ 1
ALFQ53S48 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.28■■□□□ 1
ALFQ53S48 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ALFQ53S48 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ALFQ53S48 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ALFQ53S48 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
ALFQ53S48 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ALFQ53S48 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
ALFQ53S48 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
ALFQ53S48 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALFQ53S48 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALFQ53S48 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
ALFQ53S48 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.27■■□□□ 1
ALFQ53S48 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
ALFQ53S48 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALFQ53S48 AC133552.2-202ENST00000575694 574 ntBASIC21.27■■□□□ 1
ALFQ53S48 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALFQ53S48 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.27■■□□□ 1
ALFQ53S48 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.27■■□□□ 1
ALFQ53S48 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.27■□□□□ 0.99
ALFQ53S48 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ALFQ53S48 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALFQ53S48 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALFQ53S48 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALFQ53S48 AC116050.2-201ENST00000612102 1779 ntBASIC21.26■□□□□ 0.99
ALFQ53S48 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ALFQ53S48 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.26■□□□□ 0.99
ALFQ53S48 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ALFQ53S48 AC093787.1-201ENST00000450396 207 ntBASIC21.26■□□□□ 0.99
ALFQ53S48 AC083906.2-201ENST00000511578 360 ntBASIC21.26■□□□□ 0.99
ALFQ53S48 RARRES2P4-201ENST00000514074 484 ntBASIC21.26■□□□□ 0.99
ALFQ53S48 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.26■□□□□ 0.99
ALFQ53S48 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.26■□□□□ 0.99
ALFQ53S48 AL121832.2-201ENST00000610979 668 ntBASIC21.26■□□□□ 0.99
ALFQ53S48 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ALFQ53S48 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALFQ53S48 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ALFQ53S48 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ALFQ53S48 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ALFQ53S48 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ALFQ53S48 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ALFQ53S48 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
ALFQ53S48 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALFQ53S48 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALFQ53S48 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ALFQ53S48 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ALFQ53S48 HLA-L-209ENST00000420110 1011 ntBASIC21.25■□□□□ 0.99
ALFQ53S48 AC007322.3-201ENST00000426526 701 ntBASIC21.25■□□□□ 0.99
ALFQ53S48 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.25■□□□□ 0.99
ALFQ53S48 CDV3P1-201ENST00000471403 739 ntBASIC21.25■□□□□ 0.99
ALFQ53S48 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.25■□□□□ 0.99
ALFQ53S48 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.25■□□□□ 0.99
ALFQ53S48 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ALFQ53S48 AL137060.1-201ENST00000618151 2648 ntBASIC21.25■□□□□ 0.99
ALFQ53S48 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALFQ53S48 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ALFQ53S48 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALFQ53S48 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
ALFQ53S48 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALFQ53S48 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALFQ53S48 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ALFQ53S48 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALFQ53S48 ID1-201ENST00000376105 1233 ntBASIC21.24■□□□□ 0.99
ALFQ53S48 GPX1P1-201ENST00000388829 606 ntBASIC21.24■□□□□ 0.99
ALFQ53S48 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALFQ53S48 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.24■□□□□ 0.99
ALFQ53S48 AF201337.1-201ENST00000520239 748 ntBASIC21.24■□□□□ 0.99
ALFQ53S48 AC105036.2-201ENST00000569468 176 ntBASIC21.24■□□□□ 0.99
ALFQ53S48 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALFQ53S48 AC069236.1-201ENST00000604339 616 ntBASIC21.24■□□□□ 0.99
ALFQ53S48 FAM21FP-204ENST00000608637 956 ntBASIC21.24■□□□□ 0.99
ALFQ53S48 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.24■□□□□ 0.99
ALFQ53S48 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
ALFQ53S48 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALFQ53S48 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ALFQ53S48 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ALFQ53S48 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
ALFQ53S48 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALFQ53S48 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms