Protein–RNA interactions for Protein: Q53RE8

ANKRD39, Ankyrin repeat domain-containing protein 39, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD39Q53RE8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ANKRD39Q53RE8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ANKRD39Q53RE8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ANKRD39Q53RE8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.85□□□□□ -0.03
ANKRD39Q53RE8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ANKRD39Q53RE8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
ANKRD39Q53RE8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.85□□□□□ -0.03
ANKRD39Q53RE8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
ANKRD39Q53RE8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ANKRD39Q53RE8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 AC006128.1-201ENST00000624704 1661 ntBASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 AC027702.1-201ENST00000563810 1770 ntBASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 AC104564.3-201ENST00000582367 638 ntBASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 CA15P2-201ENST00000611168 834 ntBASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 AC068418.2-201ENST00000577309 3703 ntBASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ANKRD39Q53RE8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
ANKRD39Q53RE8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.83□□□□□ -0.03
ANKRD39Q53RE8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
ANKRD39Q53RE8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ANKRD39Q53RE8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ANKRD39Q53RE8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ANKRD39Q53RE8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.83□□□□□ -0.03
ANKRD39Q53RE8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ANKRD39Q53RE8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ANKRD39Q53RE8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 HES6-205ENST00000409356 528 ntTSL 2 BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 RP9P-202ENST00000450133 1212 ntBASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ANKRD39Q53RE8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 AC093536.1-201ENST00000569153 554 ntBASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 PCDHB18P-201ENST00000524813 2368 ntBASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 AL512408.1-201ENST00000569378 2000 ntBASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 C17orf82-201ENST00000623772 1530 ntBASIC14.82□□□□□ -0.04
ANKRD39Q53RE8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ANKRD39Q53RE8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.81□□□□□ -0.04
ANKRD39Q53RE8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ANKRD39Q53RE8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
ANKRD39Q53RE8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ANKRD39Q53RE8 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms