Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 YML040WYML040W 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YML045W-AYML045W-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YMR051CYMR051C 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YNL054W-AYNL054W-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YNL284C-AYNL284C-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YOL103W-AYOL103W-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YBR012W-AYBR012W-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YOR142W-AYOR142W-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YPL257W-AYPL257W-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YPR137C-AYPR137C-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YPR158C-CYPR158C-C 1323 nt0.71□□□□□ -2.3
VPS13Q07878 YPR158W-AYPR158W-A 1323 nt0.71□□□□□ -2.3
VPS13Q07878 APM1YPL259C 1428 nt0.7□□□□□ -2.3
VPS13Q07878 ALG1YBR110W 1350 nt0.7□□□□□ -2.3
VPS13Q07878 YER160CYER160C 5268 nt0.7□□□□□ -2.3
VPS13Q07878 YJL070CYJL070C 2667 nt0.7□□□□□ -2.3
VPS13Q07878 SWC7YLR385C 399 nt0.7□□□□□ -2.3
VPS13Q07878 ATP18YML081C-A 180 nt0.7□□□□□ -2.3
VPS13Q07878 VID24YBR105C 1089 nt0.7□□□□□ -2.3
VPS13Q07878 AI2Q0055 2565 nt0.7□□□□□ -2.3
VPS13Q07878 MIG1YGL035C 1515 nt0.7□□□□□ -2.3
VPS13Q07878 YOR093CYOR093C 4947 nt0.7□□□□□ -2.3
VPS13Q07878 ORM2YLR350W 651 nt0.7□□□□□ -2.3
VPS13Q07878 SHS1YDL225W 1656 nt0.7□□□□□ -2.3
VPS13Q07878 TIM11YDR322C-A 291 nt0.69□□□□□ -2.3
VPS13Q07878 SET1YHR119W 3243 nt0.69□□□□□ -2.3
VPS13Q07878 UBC9YDL064W 474 nt0.69□□□□□ -2.3
VPS13Q07878 NOP56YLR197W 1515 nt0.69□□□□□ -2.3
VPS13Q07878 PCL6YER059W 1263 nt0.69□□□□□ -2.3
VPS13Q07878 POP8YBL018C 402 nt0.69□□□□□ -2.3
VPS13Q07878 GCN2YDR283C 4980 nt0.68□□□□□ -2.3
VPS13Q07878 TOP2YNL088W 4287 nt0.68□□□□□ -2.3
VPS13Q07878 DOM34YNL001W 1161 nt0.68□□□□□ -2.3
VPS13Q07878 HAL1YPR005C 885 nt0.68□□□□□ -2.3
VPS13Q07878 YJR061WYJR061W 2808 nt0.68□□□□□ -2.3
VPS13Q07878 MAD1YGL086W 2250 nt0.68□□□□□ -2.3
VPS13Q07878 RAV2YDR202C 1056 nt0.68□□□□□ -2.3
VPS13Q07878 YMR147WYMR147W 672 nt0.68□□□□□ -2.3
VPS13Q07878 YPR077CYPR077C 372 nt0.68□□□□□ -2.3
VPS13Q07878 PKP2YGL059W 1476 nt0.67□□□□□ -2.3
VPS13Q07878 YBR013CYBR013C 390 nt0.67□□□□□ -2.3
VPS13Q07878 HMS1YOR032C 1305 nt0.67□□□□□ -2.3
VPS13Q07878 YDL062WYDL062W 426 nt0.67□□□□□ -2.3
VPS13Q07878 GLG1YKR058W 1851 nt0.67□□□□□ -2.3
VPS13Q07878 YPR158W-BYPR158W-B 5271 nt0.67□□□□□ -2.3
VPS13Q07878 SNF5YBR289W 2718 nt0.67□□□□□ -2.3
VPS13Q07878 AIM11YER093C-A 414 nt0.67□□□□□ -2.3
VPS13Q07878 MRPL33YMR286W 261 nt0.67□□□□□ -2.3
VPS13Q07878 YOR238WYOR238W 912 nt0.67□□□□□ -2.3
VPS13Q07878 AI1Q0050 2505 nt0.66□□□□□ -2.3
VPS13Q07878 MRP2YPR166C 348 nt0.66□□□□□ -2.3
VPS13Q07878 RTG3YBL103C 1461 nt0.66□□□□□ -2.3
VPS13Q07878 CTR9YOL145C 3234 nt0.66□□□□□ -2.3
VPS13Q07878 ISW2YOR304W 3363 nt0.66□□□□□ -2.3
VPS13Q07878 TPP1YMR156C 717 nt0.65□□□□□ -2.3
VPS13Q07878 YER091C-AYER091C-A 222 nt0.65□□□□□ -2.31
VPS13Q07878 MBA1YBR185C 837 nt0.64□□□□□ -2.31
VPS13Q07878 ORC2YBR060C 1863 nt0.64□□□□□ -2.31
VPS13Q07878 DFG16YOR030W 1860 nt0.64□□□□□ -2.31
VPS13Q07878 RVS161YCR009C 798 nt0.64□□□□□ -2.31
VPS13Q07878 YER088C-AYER088C-A 324 nt0.64□□□□□ -2.31
VPS13Q07878 CDC36YDL165W 576 nt0.64□□□□□ -2.31
VPS13Q07878 SAY1YGR263C 1275 nt0.64□□□□□ -2.31
VPS13Q07878 MSN4YKL062W 1893 nt0.64□□□□□ -2.31
VPS13Q07878 FIN1YDR130C 876 nt0.63□□□□□ -2.31
VPS13Q07878 NBL1YHR199C-A 222 nt0.63□□□□□ -2.31
VPS13Q07878 IDI1YPL117C 867 nt0.63□□□□□ -2.31
VPS13Q07878 MGT1YDL200C 567 nt0.63□□□□□ -2.31
VPS13Q07878 POL5YEL055C 3069 nt0.62□□□□□ -2.31
VPS13Q07878 ORC4YPR162C 1590 nt0.62□□□□□ -2.31
VPS13Q07878 CLU1YMR012W 3834 nt0.62□□□□□ -2.31
VPS13Q07878 BPH1YCR032W 6504 nt0.62□□□□□ -2.31
VPS13Q07878 EMC4YGL231C 573 nt0.62□□□□□ -2.31
VPS13Q07878 NST1YNL091W 3723 nt0.62□□□□□ -2.31
VPS13Q07878 DEF1YKL054C 2217 nt0.62□□□□□ -2.31
VPS13Q07878 PLM2YDR501W 1566 nt0.62□□□□□ -2.31
VPS13Q07878 TFA2YKR062W 987 nt0.62□□□□□ -2.31
VPS13Q07878 SAR1YPL218W 573 nt0.62□□□□□ -2.31
VPS13Q07878 YDR179W-AYDR179W-A 1392 nt0.61□□□□□ -2.31
VPS13Q07878 YMR324CYMR324C 243 nt0.61□□□□□ -2.31
VPS13Q07878 YOL159CYOL159C 516 nt0.61□□□□□ -2.31
VPS13Q07878 NSL1YPL233W 651 nt0.61□□□□□ -2.31
VPS13Q07878 SHU2YDR078C 672 nt0.61□□□□□ -2.31
VPS13Q07878 UBX4YMR067C 1251 nt0.61□□□□□ -2.31
VPS13Q07878 YGR117CYGR117C 1431 nt0.61□□□□□ -2.31
VPS13Q07878 YSP1YHR155W 3687 nt0.6□□□□□ -2.31
VPS13Q07878 COX13YGL191W 390 nt0.6□□□□□ -2.31
VPS13Q07878 YOR082CYOR082C 342 nt0.6□□□□□ -2.31
VPS13Q07878 CDC27YBL084C 2277 nt0.6□□□□□ -2.31
VPS13Q07878 ULP2YIL031W 3105 nt0.6□□□□□ -2.31
VPS13Q07878 APL1YJR005W 2103 nt0.6□□□□□ -2.31
VPS13Q07878 TUS1YLR425W 3924 nt0.59□□□□□ -2.31
VPS13Q07878 SEC21YNL287W 2808 nt0.59□□□□□ -2.31
VPS13Q07878 NOP15YNL110C 663 nt0.59□□□□□ -2.32
VPS13Q07878 DIA2YOR080W 2199 nt0.59□□□□□ -2.32
VPS13Q07878 NSE3YDR288W 912 nt0.58□□□□□ -2.32
VPS13Q07878 SLM4YBR077C 489 nt0.58□□□□□ -2.32
VPS13Q07878 YIL012WYIL012W 342 nt0.58□□□□□ -2.32
VPS13Q07878 APD1YBR151W 951 nt0.58□□□□□ -2.32
VPS13Q07878 YBR292CYBR292C 372 nt0.58□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 57.1 ms