Protein–RNA interactions for Protein: P82673

MRPS35, 28S ribosomal protein S35, mitochondrial, humanhuman

Known RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35P82673 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MRPS35P82673 RASA4CP-201ENST00000424092 1398 ntBASIC20.21■□□□□ 0.83
MRPS35P82673 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
MRPS35P82673 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS35P82673 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS35P82673 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS35P82673 AC091305.1-201ENST00000479476 895 ntBASIC20.21■□□□□ 0.83
MRPS35P82673 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS35P82673 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS35P82673 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS35P82673 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.21■□□□□ 0.83
MRPS35P82673 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS35P82673 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS35P82673 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS35P82673 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS35P82673 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.21■□□□□ 0.83
MRPS35P82673 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS35P82673 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS35P82673 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.21■□□□□ 0.83
MRPS35P82673 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS35P82673 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
MRPS35P82673 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
MRPS35P82673 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS35P82673 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS35P82673 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS35P82673 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.2■□□□□ 0.82
MRPS35P82673 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS35P82673 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS35P82673 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.2■□□□□ 0.82
MRPS35P82673 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS35P82673 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS35P82673 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS35P82673 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS35P82673 MIR638-201ENST00000385237 100 ntBASIC20.2■□□□□ 0.82
MRPS35P82673 AC142381.2-201ENST00000566120 298 ntBASIC20.2■□□□□ 0.82
MRPS35P82673 AC005837.3-201ENST00000612163 286 ntBASIC20.2■□□□□ 0.82
MRPS35P82673 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
MRPS35P82673 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS35P82673 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS35P82673 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS35P82673 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.2■□□□□ 0.82
MRPS35P82673 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
MRPS35P82673 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
MRPS35P82673 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS35P82673 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.19■□□□□ 0.82
MRPS35P82673 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS35P82673 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS35P82673 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS35P82673 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS35P82673 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS35P82673 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS35P82673 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS35P82673 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS35P82673 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
MRPS35P82673 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS35P82673 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.19■□□□□ 0.82
MRPS35P82673 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.19■□□□□ 0.82
MRPS35P82673 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.19■□□□□ 0.82
MRPS35P82673 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.19■□□□□ 0.82
MRPS35P82673 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.19■□□□□ 0.82
MRPS35P82673 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.19■□□□□ 0.82
MRPS35P82673 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
MRPS35P82673 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS35P82673 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS35P82673 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS35P82673 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
MRPS35P82673 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
MRPS35P82673 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS35P82673 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.18■□□□□ 0.82
MRPS35P82673 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS35P82673 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS35P82673 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
MRPS35P82673 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS35P82673 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS35P82673 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS35P82673 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS35P82673 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS35P82673 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.18■□□□□ 0.82
MRPS35P82673 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.18■□□□□ 0.82
MRPS35P82673 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.18■□□□□ 0.82
MRPS35P82673 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS35P82673 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS35P82673 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS35P82673 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPS35P82673 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
MRPS35P82673 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPS35P82673 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPS35P82673 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.17■□□□□ 0.82
MRPS35P82673 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.17■□□□□ 0.82
MRPS35P82673 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MRPS35P82673 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPS35P82673 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPS35P82673 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
MRPS35P82673 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
MRPS35P82673 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.17■□□□□ 0.82
MRPS35P82673 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPS35P82673 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPS35P82673 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.16■□□□□ 0.82
MRPS35P82673 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.16■□□□□ 0.82
MRPS35P82673 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms