Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CX3CL1P78423 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CX3CL1P78423 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CX3CL1P78423 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.63■□□□□ 0.25
CX3CL1P78423 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CX3CL1P78423 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CX3CL1P78423 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CX3CL1P78423 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CX3CL1P78423 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CX3CL1P78423 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
CX3CL1P78423 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.62■□□□□ 0.25
CX3CL1P78423 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CX3CL1P78423 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CX3CL1P78423 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.62■□□□□ 0.25
CX3CL1P78423 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CX3CL1P78423 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.62■□□□□ 0.25
CX3CL1P78423 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.62■□□□□ 0.25
CX3CL1P78423 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CX3CL1P78423 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CX3CL1P78423 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CX3CL1P78423 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CX3CL1P78423 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CX3CL1P78423 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CX3CL1P78423 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CX3CL1P78423 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CX3CL1P78423 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.62■□□□□ 0.25
CX3CL1P78423 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.62■□□□□ 0.25
CX3CL1P78423 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CX3CL1P78423 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CX3CL1P78423 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CX3CL1P78423 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CL1P78423 AF106564.1-201ENST00000607058 2553 ntBASIC16.61■□□□□ 0.25
CX3CL1P78423 MIR935-201ENST00000401179 91 ntBASIC16.61■□□□□ 0.25
CX3CL1P78423 KRT18P61-201ENST00000585825 1298 ntBASIC16.61■□□□□ 0.25
CX3CL1P78423 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CX3CL1P78423 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CL1P78423 MIR5787-201ENST00000611784 55 ntBASIC16.61■□□□□ 0.25
CX3CL1P78423 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CL1P78423 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.61■□□□□ 0.25
CX3CL1P78423 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.61■□□□□ 0.25
CX3CL1P78423 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CL1P78423 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CL1P78423 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.61■□□□□ 0.25
CX3CL1P78423 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CL1P78423 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CX3CL1P78423 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CL1P78423 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CX3CL1P78423 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.6■□□□□ 0.25
CX3CL1P78423 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
CX3CL1P78423 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.6■□□□□ 0.25
CX3CL1P78423 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.6■□□□□ 0.25
CX3CL1P78423 AC120498.10-201ENST00000621827 505 ntBASIC16.6■□□□□ 0.25
CX3CL1P78423 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.6■□□□□ 0.25
CX3CL1P78423 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CX3CL1P78423 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.6■□□□□ 0.25
CX3CL1P78423 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CX3CL1P78423 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.6■□□□□ 0.25
CX3CL1P78423 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CX3CL1P78423 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CL1P78423 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
CX3CL1P78423 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.59■□□□□ 0.25
CX3CL1P78423 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CL1P78423 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CL1P78423 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CL1P78423 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CL1P78423 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.59■□□□□ 0.25
CX3CL1P78423 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CX3CL1P78423 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CL1P78423 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CL1P78423 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CL1P78423 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CL1P78423 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.59■□□□□ 0.25
CX3CL1P78423 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CX3CL1P78423 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CX3CL1P78423 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CX3CL1P78423 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.58■□□□□ 0.25
CX3CL1P78423 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CX3CL1P78423 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CX3CL1P78423 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CX3CL1P78423 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CX3CL1P78423 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CX3CL1P78423 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CX3CL1P78423 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CX3CL1P78423 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CX3CL1P78423 KRT18P5-201ENST00000436075 1291 ntBASIC16.58■□□□□ 0.24
CX3CL1P78423 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms