Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.15■□□□□ 0.5
LSM6P62312 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM6P62312 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LSM6P62312 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.14■□□□□ 0.5
LSM6P62312 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.14■□□□□ 0.5
LSM6P62312 AC007225.1-201ENST00000566331 1836 ntBASIC18.14■□□□□ 0.5
LSM6P62312 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.14■□□□□ 0.49
LSM6P62312 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM6P62312 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LSM6P62312 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM6P62312 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LSM6P62312 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LSM6P62312 FEM1AP1-201ENST00000431297 1995 ntBASIC18.14■□□□□ 0.49
LSM6P62312 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.14■□□□□ 0.49
LSM6P62312 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LSM6P62312 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LSM6P62312 NTF6G-201ENST00000591094 616 ntBASIC18.14■□□□□ 0.49
LSM6P62312 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.14■□□□□ 0.49
LSM6P62312 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LSM6P62312 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.14■□□□□ 0.49
LSM6P62312 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM6P62312 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.14■□□□□ 0.49
LSM6P62312 AC116050.2-201ENST00000612102 1779 ntBASIC18.14■□□□□ 0.49
LSM6P62312 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM6P62312 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM6P62312 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM6P62312 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM6P62312 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LSM6P62312 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LSM6P62312 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.13■□□□□ 0.49
LSM6P62312 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LSM6P62312 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LSM6P62312 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LSM6P62312 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.13■□□□□ 0.49
LSM6P62312 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LSM6P62312 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.13■□□□□ 0.49
LSM6P62312 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.13■□□□□ 0.49
LSM6P62312 KRT18P61-201ENST00000585825 1298 ntBASIC18.13■□□□□ 0.49
LSM6P62312 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LSM6P62312 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM6P62312 AC019069.1-201ENST00000610008 1333 ntBASIC18.13■□□□□ 0.49
LSM6P62312 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM6P62312 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.13■□□□□ 0.49
LSM6P62312 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LSM6P62312 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM6P62312 RBM17P2-201ENST00000616397 1405 ntBASIC18.13■□□□□ 0.49
LSM6P62312 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.13■□□□□ 0.49
LSM6P62312 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM6P62312 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.13■□□□□ 0.49
LSM6P62312 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM6P62312 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.12■□□□□ 0.49
LSM6P62312 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LSM6P62312 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM6P62312 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LSM6P62312 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM6P62312 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.12■□□□□ 0.49
LSM6P62312 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LSM6P62312 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM6P62312 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM6P62312 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.12■□□□□ 0.49
LSM6P62312 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM6P62312 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.12■□□□□ 0.49
LSM6P62312 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.12■□□□□ 0.49
LSM6P62312 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.12■□□□□ 0.49
LSM6P62312 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.12■□□□□ 0.49
LSM6P62312 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.12■□□□□ 0.49
LSM6P62312 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.12■□□□□ 0.49
LSM6P62312 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LSM6P62312 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM6P62312 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM6P62312 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LSM6P62312 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LSM6P62312 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.12■□□□□ 0.49
LSM6P62312 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM6P62312 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM6P62312 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM6P62312 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LSM6P62312 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSM6P62312 LINC01521-201ENST00000504184 1943 ntBASIC18.11■□□□□ 0.49
LSM6P62312 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSM6P62312 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.11■□□□□ 0.49
LSM6P62312 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LSM6P62312 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSM6P62312 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
LSM6P62312 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.11■□□□□ 0.49
LSM6P62312 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSM6P62312 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.11■□□□□ 0.49
LSM6P62312 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.11■□□□□ 0.49
LSM6P62312 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.11■□□□□ 0.49
LSM6P62312 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.11■□□□□ 0.49
LSM6P62312 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LSM6P62312 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
LSM6P62312 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM6P62312 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LSM6P62312 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LSM6P62312 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM6P62312 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.11■□□□□ 0.49
LSM6P62312 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM6P62312 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM6P62312 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms