Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
EIF3EP60228 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.31■■□□□ 1
EIF3EP60228 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
EIF3EP60228 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EIF3EP60228 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
EIF3EP60228 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EIF3EP60228 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EIF3EP60228 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EIF3EP60228 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
EIF3EP60228 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
EIF3EP60228 AC104187.1-201ENST00000607510 612 ntBASIC21.31■■□□□ 1
EIF3EP60228 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.31■■□□□ 1
EIF3EP60228 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
EIF3EP60228 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EIF3EP60228 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EIF3EP60228 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
EIF3EP60228 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.31■■□□□ 1
EIF3EP60228 FP700111.2-201ENST00000619190 1892 ntBASIC21.3■■□□□ 1
EIF3EP60228 KRT16P2-201ENST00000414673 1423 ntBASIC21.3■■□□□ 1
EIF3EP60228 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
EIF3EP60228 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EIF3EP60228 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.3■■□□□ 1
EIF3EP60228 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
EIF3EP60228 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.3■■□□□ 1
EIF3EP60228 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EIF3EP60228 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
EIF3EP60228 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.3■■□□□ 1
EIF3EP60228 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.3■■□□□ 1
EIF3EP60228 AC120498.10-201ENST00000621827 505 ntBASIC21.3■■□□□ 1
EIF3EP60228 RARRES2P11-201ENST00000635158 484 ntBASIC21.3■■□□□ 1
EIF3EP60228 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EIF3EP60228 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.3■■□□□ 1
EIF3EP60228 AC027702.1-201ENST00000563810 1770 ntBASIC21.3■■□□□ 1
EIF3EP60228 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.3■■□□□ 1
EIF3EP60228 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EIF3EP60228 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
EIF3EP60228 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.29■■□□□ 1
EIF3EP60228 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.29■■□□□ 1
EIF3EP60228 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
EIF3EP60228 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
EIF3EP60228 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
EIF3EP60228 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.29■■□□□ 1
EIF3EP60228 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.29■■□□□ 1
EIF3EP60228 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.29■■□□□ 1
EIF3EP60228 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.29■■□□□ 1
EIF3EP60228 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 YBX1P1-201ENST00000445822 960 ntBASIC21.29■■□□□ 1
EIF3EP60228 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.29■■□□□ 1
EIF3EP60228 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 DUX4L2-201ENST00000561772 1275 ntBASIC21.29■■□□□ 1
EIF3EP60228 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.29■■□□□ 1
EIF3EP60228 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.29■■□□□ 1
EIF3EP60228 TERF1P2-201ENST00000583350 1212 ntBASIC21.29■■□□□ 1
EIF3EP60228 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.29■■□□□ 1
EIF3EP60228 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.29■■□□□ 1
EIF3EP60228 DUX4L6-201ENST00000626483 1275 ntBASIC21.29■■□□□ 1
EIF3EP60228 DUX4L1-201ENST00000627662 1275 ntBASIC21.29■■□□□ 1
EIF3EP60228 DUX4L8-201ENST00000629013 1275 ntBASIC21.29■■□□□ 1
EIF3EP60228 DUX4L3-201ENST00000630187 1275 ntBASIC21.29■■□□□ 1
EIF3EP60228 DUX4L7-201ENST00000630678 1275 ntBASIC21.29■■□□□ 1
EIF3EP60228 DUX4L5-201ENST00000630834 1275 ntBASIC21.29■■□□□ 1
EIF3EP60228 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.29■■□□□ 1
EIF3EP60228 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EIF3EP60228 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
EIF3EP60228 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EIF3EP60228 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
EIF3EP60228 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
EIF3EP60228 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EIF3EP60228 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
EIF3EP60228 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EIF3EP60228 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.28■■□□□ 1
EIF3EP60228 AC245052.3-201ENST00000450182 901 ntBASIC21.28■■□□□ 1
EIF3EP60228 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EIF3EP60228 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.28■■□□□ 1
EIF3EP60228 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
EIF3EP60228 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
EIF3EP60228 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.28■■□□□ 1
EIF3EP60228 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.27■■□□□ 1
EIF3EP60228 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EIF3EP60228 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EIF3EP60228 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.27■■□□□ 1
EIF3EP60228 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
EIF3EP60228 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.27■■□□□ 1
EIF3EP60228 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.27■■□□□ 1
EIF3EP60228 AP001160.3-201ENST00000601484 763 ntBASIC21.27■■□□□ 1
EIF3EP60228 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.27■■□□□ 1
EIF3EP60228 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
EIF3EP60228 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms