Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN18P56856 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN18P56856 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.52■□□□□ 0.55
CLDN18P56856 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN18P56856 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CLDN18P56856 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN18P56856 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CLDN18P56856 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN18P56856 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN18P56856 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CLDN18P56856 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN18P56856 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN18P56856 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN18P56856 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN18P56856 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.51■□□□□ 0.55
CLDN18P56856 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN18P56856 CYP2T3P-201ENST00000601990 817 ntBASIC18.51■□□□□ 0.55
CLDN18P56856 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CLDN18P56856 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN18P56856 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLDN18P56856 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN18P56856 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN18P56856 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN18P56856 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN18P56856 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN18P56856 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CLDN18P56856 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CLDN18P56856 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN18P56856 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN18P56856 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN18P56856 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CLDN18P56856 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 AL024507.2-201ENST00000606070 2574 ntBASIC18.5■□□□□ 0.55
CLDN18P56856 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLDN18P56856 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.5■□□□□ 0.55
CLDN18P56856 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 MCRIP2P1-201ENST00000394346 511 ntBASIC18.5■□□□□ 0.55
CLDN18P56856 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 AL355472.2-201ENST00000422958 438 ntBASIC18.5■□□□□ 0.55
CLDN18P56856 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.5■□□□□ 0.55
CLDN18P56856 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN18P56856 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN18P56856 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CLDN18P56856 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN18P56856 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN18P56856 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN18P56856 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN18P56856 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN18P56856 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN18P56856 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CLDN18P56856 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN18P56856 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.49■□□□□ 0.55
CLDN18P56856 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.49■□□□□ 0.55
CLDN18P56856 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN18P56856 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.49■□□□□ 0.55
CLDN18P56856 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN18P56856 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN18P56856 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CLDN18P56856 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN18P56856 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN18P56856 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLDN18P56856 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN18P56856 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN18P56856 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CLDN18P56856 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN18P56856 KRT17P1-201ENST00000399211 1546 ntBASIC18.49■□□□□ 0.55
CLDN18P56856 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.49■□□□□ 0.55
CLDN18P56856 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN18P56856 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN18P56856 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN18P56856 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN18P56856 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN18P56856 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN18P56856 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN18P56856 CYP21A1P-202ENST00000354927 1481 ntBASIC18.48■□□□□ 0.55
CLDN18P56856 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN18P56856 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN18P56856 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.48■□□□□ 0.55
CLDN18P56856 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN18P56856 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.48■□□□□ 0.55
CLDN18P56856 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN18P56856 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN18P56856 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms