Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.9■□□□□ 0.94
WNT3AP56704 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.9■□□□□ 0.94
WNT3AP56704 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
WNT3AP56704 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.9■□□□□ 0.94
WNT3AP56704 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3AP56704 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3AP56704 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
WNT3AP56704 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3AP56704 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3AP56704 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
WNT3AP56704 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3AP56704 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.9■□□□□ 0.94
WNT3AP56704 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
WNT3AP56704 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
WNT3AP56704 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
WNT3AP56704 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.89■□□□□ 0.94
WNT3AP56704 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
WNT3AP56704 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.89■□□□□ 0.93
WNT3AP56704 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.89■□□□□ 0.93
WNT3AP56704 AC091799.1-201ENST00000422823 811 ntBASIC20.89■□□□□ 0.93
WNT3AP56704 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.89■□□□□ 0.93
WNT3AP56704 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
WNT3AP56704 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.89■□□□□ 0.93
WNT3AP56704 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
WNT3AP56704 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.89■□□□□ 0.93
WNT3AP56704 AC010536.3-201ENST00000620306 533 ntBASIC20.89■□□□□ 0.93
WNT3AP56704 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
WNT3AP56704 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
WNT3AP56704 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
WNT3AP56704 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
WNT3AP56704 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
WNT3AP56704 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
WNT3AP56704 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
WNT3AP56704 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
WNT3AP56704 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.88■□□□□ 0.93
WNT3AP56704 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
WNT3AP56704 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
WNT3AP56704 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
WNT3AP56704 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
WNT3AP56704 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.88■□□□□ 0.93
WNT3AP56704 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.88■□□□□ 0.93
WNT3AP56704 AC006015.1-201ENST00000429970 570 ntBASIC20.88■□□□□ 0.93
WNT3AP56704 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
WNT3AP56704 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.88■□□□□ 0.93
WNT3AP56704 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
WNT3AP56704 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
WNT3AP56704 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
WNT3AP56704 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
WNT3AP56704 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.88■□□□□ 0.93
WNT3AP56704 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
WNT3AP56704 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
WNT3AP56704 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
WNT3AP56704 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
WNT3AP56704 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
WNT3AP56704 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
WNT3AP56704 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
WNT3AP56704 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
WNT3AP56704 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.87■□□□□ 0.93
WNT3AP56704 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.87■□□□□ 0.93
WNT3AP56704 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.87■□□□□ 0.93
WNT3AP56704 MFSD11-216ENST00000590393 1141 ntBASIC20.87■□□□□ 0.93
WNT3AP56704 AC022517.1-201ENST00000592429 346 ntBASIC20.87■□□□□ 0.93
WNT3AP56704 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
WNT3AP56704 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
WNT3AP56704 AC116050.2-201ENST00000612102 1779 ntBASIC20.87■□□□□ 0.93
WNT3AP56704 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
WNT3AP56704 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
WNT3AP56704 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3AP56704 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.86■□□□□ 0.93
WNT3AP56704 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3AP56704 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
WNT3AP56704 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
WNT3AP56704 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3AP56704 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3AP56704 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3AP56704 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.86■□□□□ 0.93
WNT3AP56704 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
WNT3AP56704 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.86■□□□□ 0.93
WNT3AP56704 TERF1P5-201ENST00000477545 1207 ntBASIC20.86■□□□□ 0.93
WNT3AP56704 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3AP56704 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.86■□□□□ 0.93
WNT3AP56704 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3AP56704 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
WNT3AP56704 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
WNT3AP56704 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
WNT3AP56704 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3AP56704 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
WNT3AP56704 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3AP56704 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.86■□□□□ 0.93
WNT3AP56704 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3AP56704 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3AP56704 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
WNT3AP56704 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3AP56704 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3AP56704 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3AP56704 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3AP56704 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
WNT3AP56704 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
WNT3AP56704 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.85■□□□□ 0.93
WNT3AP56704 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms