Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
NCKAP1LP55160 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
NCKAP1LP55160 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NCKAP1LP55160 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
NCKAP1LP55160 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.72■■□□□ 1.23
NCKAP1LP55160 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NCKAP1LP55160 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
NCKAP1LP55160 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NCKAP1LP55160 AC121338.2-201ENST00000622535 1744 ntBASIC22.71■■□□□ 1.23
NCKAP1LP55160 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.71■■□□□ 1.23
NCKAP1LP55160 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
NCKAP1LP55160 AL137060.1-201ENST00000618151 2648 ntBASIC22.71■■□□□ 1.23
NCKAP1LP55160 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NCKAP1LP55160 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NCKAP1LP55160 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NCKAP1LP55160 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.71■■□□□ 1.23
NCKAP1LP55160 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.71■■□□□ 1.23
NCKAP1LP55160 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.71■■□□□ 1.23
NCKAP1LP55160 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NCKAP1LP55160 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
NCKAP1LP55160 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NCKAP1LP55160 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
NCKAP1LP55160 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.71■■□□□ 1.23
NCKAP1LP55160 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NCKAP1LP55160 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
NCKAP1LP55160 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.7■■□□□ 1.22
NCKAP1LP55160 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.7■■□□□ 1.22
NCKAP1LP55160 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NCKAP1LP55160 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.7■■□□□ 1.22
NCKAP1LP55160 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.7■■□□□ 1.22
NCKAP1LP55160 AC133552.2-202ENST00000575694 574 ntBASIC22.7■■□□□ 1.22
NCKAP1LP55160 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
NCKAP1LP55160 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
NCKAP1LP55160 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.7■■□□□ 1.22
NCKAP1LP55160 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
NCKAP1LP55160 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
NCKAP1LP55160 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.7■■□□□ 1.22
NCKAP1LP55160 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.7■■□□□ 1.22
NCKAP1LP55160 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
NCKAP1LP55160 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.7■■□□□ 1.22
NCKAP1LP55160 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.7■■□□□ 1.22
NCKAP1LP55160 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
NCKAP1LP55160 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
NCKAP1LP55160 PLK5-205ENST00000642079 1969 ntBASIC22.69■■□□□ 1.22
NCKAP1LP55160 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NCKAP1LP55160 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NCKAP1LP55160 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.69■■□□□ 1.22
NCKAP1LP55160 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.69■■□□□ 1.22
NCKAP1LP55160 AC006970.2-201ENST00000450065 779 ntBASIC22.69■■□□□ 1.22
NCKAP1LP55160 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.69■■□□□ 1.22
NCKAP1LP55160 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.69■■□□□ 1.22
NCKAP1LP55160 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NCKAP1LP55160 AC069236.1-201ENST00000604339 616 ntBASIC22.69■■□□□ 1.22
NCKAP1LP55160 OR10C1-204ENST00000622521 1039 ntBASIC22.69■■□□□ 1.22
NCKAP1LP55160 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NCKAP1LP55160 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NCKAP1LP55160 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
NCKAP1LP55160 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NCKAP1LP55160 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
NCKAP1LP55160 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
NCKAP1LP55160 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.68■■□□□ 1.22
NCKAP1LP55160 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.68■■□□□ 1.22
NCKAP1LP55160 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NCKAP1LP55160 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NCKAP1LP55160 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.68■■□□□ 1.22
NCKAP1LP55160 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
NCKAP1LP55160 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NCKAP1LP55160 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
NCKAP1LP55160 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.67■■□□□ 1.22
NCKAP1LP55160 NCF1B-203ENST00000435988 1254 ntBASIC22.67■■□□□ 1.22
NCKAP1LP55160 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.67■■□□□ 1.22
NCKAP1LP55160 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.67■■□□□ 1.22
NCKAP1LP55160 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.67■■□□□ 1.22
NCKAP1LP55160 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
NCKAP1LP55160 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.67■■□□□ 1.22
NCKAP1LP55160 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NCKAP1LP55160 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.67■■□□□ 1.22
NCKAP1LP55160 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NCKAP1LP55160 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NCKAP1LP55160 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.66■■□□□ 1.22
NCKAP1LP55160 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.66■■□□□ 1.22
NCKAP1LP55160 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NCKAP1LP55160 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.66■■□□□ 1.22
NCKAP1LP55160 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.66■■□□□ 1.22
NCKAP1LP55160 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.66■■□□□ 1.22
NCKAP1LP55160 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.66■■□□□ 1.22
NCKAP1LP55160 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
NCKAP1LP55160 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NCKAP1LP55160 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NCKAP1LP55160 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.65■■□□□ 1.22
NCKAP1LP55160 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.65■■□□□ 1.22
NCKAP1LP55160 AL512625.2-201ENST00000417533 625 ntBASIC22.65■■□□□ 1.22
NCKAP1LP55160 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.65■■□□□ 1.22
NCKAP1LP55160 AC093787.1-201ENST00000450396 207 ntBASIC22.65■■□□□ 1.22
NCKAP1LP55160 AC008694.1-202ENST00000636953 945 ntBASIC22.65■■□□□ 1.22
NCKAP1LP55160 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NCKAP1LP55160 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NCKAP1LP55160 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
NCKAP1LP55160 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NCKAP1LP55160 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms