Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN3P54252 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN3P54252 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN3P54252 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.02■□□□□ 0.96
ATXN3P54252 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN3P54252 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN3P54252 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.02■□□□□ 0.96
ATXN3P54252 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.02■□□□□ 0.96
ATXN3P54252 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
ATXN3P54252 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.02■□□□□ 0.96
ATXN3P54252 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.02■□□□□ 0.96
ATXN3P54252 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN3P54252 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATXN3P54252 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ATXN3P54252 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ATXN3P54252 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN3P54252 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN3P54252 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN3P54252 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ATXN3P54252 AC073130.3-201ENST00000624389 2278 ntBASIC21.01■□□□□ 0.95
ATXN3P54252 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN3P54252 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN3P54252 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.01■□□□□ 0.95
ATXN3P54252 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ATXN3P54252 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.01■□□□□ 0.95
ATXN3P54252 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.01■□□□□ 0.95
ATXN3P54252 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN3P54252 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.01■□□□□ 0.95
ATXN3P54252 RARRES2P4-201ENST00000514074 484 ntBASIC21.01■□□□□ 0.95
ATXN3P54252 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.01■□□□□ 0.95
ATXN3P54252 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.01■□□□□ 0.95
ATXN3P54252 AC092118.2-201ENST00000613495 667 ntBASIC21.01■□□□□ 0.95
ATXN3P54252 AC120498.10-201ENST00000621827 505 ntBASIC21.01■□□□□ 0.95
ATXN3P54252 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN3P54252 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.01■□□□□ 0.95
ATXN3P54252 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.01■□□□□ 0.95
ATXN3P54252 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN3P54252 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN3P54252 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN3P54252 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN3P54252 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATXN3P54252 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ATXN3P54252 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ATXN3P54252 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
ATXN3P54252 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ATXN3P54252 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATXN3P54252 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATXN3P54252 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
ATXN3P54252 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ATXN3P54252 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ATXN3P54252 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
ATXN3P54252 DUSP5P2-201ENST00000426873 1033 ntBASIC21■□□□□ 0.95
ATXN3P54252 RPS2P52-201ENST00000469610 820 ntBASIC21■□□□□ 0.95
ATXN3P54252 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21■□□□□ 0.95
ATXN3P54252 AC007322.4-201ENST00000509611 723 ntBASIC21■□□□□ 0.95
ATXN3P54252 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATXN3P54252 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21■□□□□ 0.95
ATXN3P54252 AC079089.2-201ENST00000531211 1277 ntBASIC21■□□□□ 0.95
ATXN3P54252 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21■□□□□ 0.95
ATXN3P54252 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21■□□□□ 0.95
ATXN3P54252 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATXN3P54252 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATXN3P54252 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATXN3P54252 BX276092.2-201ENST00000417668 665 ntBASIC20.99■□□□□ 0.95
ATXN3P54252 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ATXN3P54252 AC097658.1-201ENST00000475555 843 ntBASIC20.99■□□□□ 0.95
ATXN3P54252 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.99■□□□□ 0.95
ATXN3P54252 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATXN3P54252 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.99■□□□□ 0.95
ATXN3P54252 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ATXN3P54252 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.99■□□□□ 0.95
ATXN3P54252 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.99■□□□□ 0.95
ATXN3P54252 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATXN3P54252 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.99■□□□□ 0.95
ATXN3P54252 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATXN3P54252 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN3P54252 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN3P54252 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN3P54252 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN3P54252 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN3P54252 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN3P54252 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN3P54252 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN3P54252 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.98■□□□□ 0.95
ATXN3P54252 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.98■□□□□ 0.95
ATXN3P54252 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN3P54252 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN3P54252 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN3P54252 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ATXN3P54252 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN3P54252 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.98■□□□□ 0.95
ATXN3P54252 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.98■□□□□ 0.95
ATXN3P54252 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN3P54252 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATXN3P54252 ESRRAP1-201ENST00000400596 1257 ntBASIC20.98■□□□□ 0.95
ATXN3P54252 AL512625.2-201ENST00000417533 625 ntBASIC20.98■□□□□ 0.95
ATXN3P54252 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.98■□□□□ 0.95
ATXN3P54252 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.98■□□□□ 0.95
ATXN3P54252 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.98■□□□□ 0.95
ATXN3P54252 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms