Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUBP1P53384 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NUBP1P53384 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.75■□□□□ 0.91
NUBP1P53384 KRT18P57-201ENST00000443599 1254 ntBASIC20.75■□□□□ 0.91
NUBP1P53384 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.75■□□□□ 0.91
NUBP1P53384 RBM17P1-201ENST00000453646 1190 ntBASIC20.75■□□□□ 0.91
NUBP1P53384 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
NUBP1P53384 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.75■□□□□ 0.91
NUBP1P53384 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NUBP1P53384 AL390728.6-201ENST00000566446 1246 ntBASIC20.75■□□□□ 0.91
NUBP1P53384 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.75■□□□□ 0.91
NUBP1P53384 AC091076.1-201ENST00000610741 619 ntBASIC20.75■□□□□ 0.91
NUBP1P53384 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.75■□□□□ 0.91
NUBP1P53384 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NUBP1P53384 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
NUBP1P53384 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUBP1P53384 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUBP1P53384 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUBP1P53384 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUBP1P53384 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUBP1P53384 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.74■□□□□ 0.91
NUBP1P53384 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUBP1P53384 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUBP1P53384 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUBP1P53384 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUBP1P53384 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUBP1P53384 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.74■□□□□ 0.91
NUBP1P53384 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.74■□□□□ 0.91
NUBP1P53384 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUBP1P53384 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.74■□□□□ 0.91
NUBP1P53384 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.74■□□□□ 0.91
NUBP1P53384 NAPSB-206ENST00000562112 1266 ntBASIC20.74■□□□□ 0.91
NUBP1P53384 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.74■□□□□ 0.91
NUBP1P53384 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.74■□□□□ 0.91
NUBP1P53384 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.74■□□□□ 0.91
NUBP1P53384 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.74■□□□□ 0.91
NUBP1P53384 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NUBP1P53384 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUBP1P53384 AC142381.3-201ENST00000568208 1670 ntBASIC20.73■□□□□ 0.91
NUBP1P53384 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUBP1P53384 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.73■□□□□ 0.91
NUBP1P53384 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUBP1P53384 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUBP1P53384 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUBP1P53384 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUBP1P53384 AL390719.1-204ENST00000412397 1219 ntBASIC20.73■□□□□ 0.91
NUBP1P53384 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NUBP1P53384 KRT16P5-201ENST00000455284 522 ntBASIC20.73■□□□□ 0.91
NUBP1P53384 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUBP1P53384 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.73■□□□□ 0.91
NUBP1P53384 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
NUBP1P53384 AC073195.1-201ENST00000607241 877 ntBASIC20.73■□□□□ 0.91
NUBP1P53384 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUBP1P53384 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NUBP1P53384 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUBP1P53384 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUBP1P53384 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.72■□□□□ 0.91
NUBP1P53384 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
NUBP1P53384 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.72■□□□□ 0.91
NUBP1P53384 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
NUBP1P53384 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUBP1P53384 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUBP1P53384 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.72■□□□□ 0.91
NUBP1P53384 KRT126P-201ENST00000549467 1181 ntBASIC20.72■□□□□ 0.91
NUBP1P53384 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.72■□□□□ 0.91
NUBP1P53384 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUBP1P53384 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUBP1P53384 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUBP1P53384 HTR7P1-201ENST00000538670 1336 ntBASIC20.72■□□□□ 0.91
NUBP1P53384 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUBP1P53384 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NUBP1P53384 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NUBP1P53384 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUBP1P53384 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUBP1P53384 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NUBP1P53384 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.71■□□□□ 0.91
NUBP1P53384 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NUBP1P53384 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NUBP1P53384 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.71■□□□□ 0.91
NUBP1P53384 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.71■□□□□ 0.91
NUBP1P53384 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.71■□□□□ 0.91
NUBP1P53384 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NUBP1P53384 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.71■□□□□ 0.91
NUBP1P53384 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.71■□□□□ 0.91
NUBP1P53384 AL031963.3-201ENST00000606441 850 ntBASIC20.71■□□□□ 0.91
NUBP1P53384 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.71■□□□□ 0.91
NUBP1P53384 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NUBP1P53384 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
NUBP1P53384 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NUBP1P53384 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
NUBP1P53384 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.7■□□□□ 0.91
NUBP1P53384 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUBP1P53384 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUBP1P53384 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUBP1P53384 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NUBP1P53384 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUBP1P53384 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUBP1P53384 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUBP1P53384 SLC25A3P1-201ENST00000443844 931 ntBASIC20.7■□□□□ 0.9
NUBP1P53384 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms