Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC25A1P53007 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SLC25A1P53007 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC25A1P53007 KRT16P2-201ENST00000414673 1423 ntBASIC18.38■□□□□ 0.53
SLC25A1P53007 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC25A1P53007 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC25A1P53007 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC25A1P53007 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SLC25A1P53007 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC25A1P53007 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SLC25A1P53007 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 RARRES2P11-201ENST00000635158 484 ntBASIC18.37■□□□□ 0.53
SLC25A1P53007 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SLC25A1P53007 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SLC25A1P53007 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
SLC25A1P53007 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SLC25A1P53007 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC25A1P53007 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC25A1P53007 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC25A1P53007 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC25A1P53007 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC25A1P53007 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.36■□□□□ 0.53
SLC25A1P53007 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SLC25A1P53007 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC25A1P53007 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC25A1P53007 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC25A1P53007 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC25A1P53007 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC25A1P53007 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC25A1P53007 MIR6084-201ENST00000622012 110 ntBASIC18.36■□□□□ 0.53
SLC25A1P53007 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC25A1P53007 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC25A1P53007 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC25A1P53007 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC25A1P53007 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC25A1P53007 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC25A1P53007 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC25A1P53007 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC25A1P53007 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC25A1P53007 AC245052.3-201ENST00000450182 901 ntBASIC18.35■□□□□ 0.53
SLC25A1P53007 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC25A1P53007 AC142381.2-201ENST00000566120 298 ntBASIC18.35■□□□□ 0.53
SLC25A1P53007 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SLC25A1P53007 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC25A1P53007 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC25A1P53007 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC25A1P53007 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC25A1P53007 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC25A1P53007 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC25A1P53007 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC25A1P53007 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC25A1P53007 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC25A1P53007 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC25A1P53007 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC25A1P53007 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC25A1P53007 AC120498.10-201ENST00000621827 505 ntBASIC18.34■□□□□ 0.53
SLC25A1P53007 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC25A1P53007 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC25A1P53007 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC25A1P53007 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC25A1P53007 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC25A1P53007 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC25A1P53007 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC25A1P53007 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC25A1P53007 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC25A1P53007 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC25A1P53007 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.33■□□□□ 0.53
SLC25A1P53007 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC25A1P53007 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC25A1P53007 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC25A1P53007 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.33■□□□□ 0.53
SLC25A1P53007 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SLC25A1P53007 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC25A1P53007 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC25A1P53007 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC25A1P53007 AC027612.3-201ENST00000413684 1047 ntBASIC18.33■□□□□ 0.52
SLC25A1P53007 AC010141.2-201ENST00000452426 721 ntBASIC18.33■□□□□ 0.52
SLC25A1P53007 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC25A1P53007 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC25A1P53007 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SLC25A1P53007 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC25A1P53007 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC25A1P53007 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC25A1P53007 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms