Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HCFC1P51610 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HCFC1P51610 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.12■□□□□ 0.49
HCFC1P51610 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HCFC1P51610 ECEL1P3-201ENST00000427961 737 ntBASIC18.12■□□□□ 0.49
HCFC1P51610 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.12■□□□□ 0.49
HCFC1P51610 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HCFC1P51610 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.12■□□□□ 0.49
HCFC1P51610 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
HCFC1P51610 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HCFC1P51610 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HCFC1P51610 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.12■□□□□ 0.49
HCFC1P51610 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HCFC1P51610 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HCFC1P51610 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HCFC1P51610 LINC00565-201ENST00000562710 2331 ntBASIC18.12■□□□□ 0.49
HCFC1P51610 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.12■□□□□ 0.49
HCFC1P51610 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HCFC1P51610 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.11■□□□□ 0.49
HCFC1P51610 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.11■□□□□ 0.49
HCFC1P51610 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.11■□□□□ 0.49
HCFC1P51610 MIR718-201ENST00000390190 70 ntBASIC18.11■□□□□ 0.49
HCFC1P51610 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.11■□□□□ 0.49
HCFC1P51610 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.11■□□□□ 0.49
HCFC1P51610 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.11■□□□□ 0.49
HCFC1P51610 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HCFC1P51610 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HCFC1P51610 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.11■□□□□ 0.49
HCFC1P51610 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.11■□□□□ 0.49
HCFC1P51610 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.11■□□□□ 0.49
HCFC1P51610 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.11■□□□□ 0.49
HCFC1P51610 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.11■□□□□ 0.49
HCFC1P51610 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.11■□□□□ 0.49
HCFC1P51610 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.11■□□□□ 0.49
HCFC1P51610 AC105020.6-201ENST00000621523 1217 ntBASIC18.11■□□□□ 0.49
HCFC1P51610 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HCFC1P51610 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HCFC1P51610 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HCFC1P51610 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HCFC1P51610 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HCFC1P51610 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HCFC1P51610 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
HCFC1P51610 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.1■□□□□ 0.49
HCFC1P51610 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HCFC1P51610 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.1■□□□□ 0.49
HCFC1P51610 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HCFC1P51610 AL589743.5-201ENST00000616611 1050 ntBASIC18.1■□□□□ 0.49
HCFC1P51610 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HCFC1P51610 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HCFC1P51610 AC010542.4-201ENST00000563151 1910 ntBASIC18.1■□□□□ 0.49
HCFC1P51610 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HCFC1P51610 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HCFC1P51610 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HCFC1P51610 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HCFC1P51610 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HCFC1P51610 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.1■□□□□ 0.49
HCFC1P51610 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.1■□□□□ 0.49
HCFC1P51610 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.1■□□□□ 0.49
HCFC1P51610 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.1■□□□□ 0.49
HCFC1P51610 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.09■□□□□ 0.49
HCFC1P51610 AC079834.2-201ENST00000609776 1949 ntBASIC18.09■□□□□ 0.49
HCFC1P51610 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.09■□□□□ 0.49
HCFC1P51610 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1P51610 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HCFC1P51610 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.09■□□□□ 0.49
HCFC1P51610 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1P51610 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1P51610 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.09■□□□□ 0.49
HCFC1P51610 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1P51610 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1P51610 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1P51610 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1P51610 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1P51610 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.09■□□□□ 0.49
HCFC1P51610 AC087633.2-202ENST00000565166 1439 ntBASIC18.09■□□□□ 0.49
HCFC1P51610 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1P51610 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1P51610 GUSBP5-202ENST00000510805 1989 ntBASIC18.09■□□□□ 0.49
HCFC1P51610 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1P51610 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HCFC1P51610 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HCFC1P51610 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HCFC1P51610 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
HCFC1P51610 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HCFC1P51610 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HCFC1P51610 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HCFC1P51610 SOX15-203ENST00000570788 1093 ntBASIC18.08■□□□□ 0.49
HCFC1P51610 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HCFC1P51610 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HCFC1P51610 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.08■□□□□ 0.49
HCFC1P51610 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.08■□□□□ 0.49
HCFC1P51610 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.08■□□□□ 0.49
HCFC1P51610 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1P51610 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
HCFC1P51610 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1P51610 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
HCFC1P51610 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1P51610 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.08■□□□□ 0.48
HCFC1P51610 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HCFC1P51610 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms