Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.71■□□□□ 0.75
SSR2P43308 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.71■□□□□ 0.75
SSR2P43308 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.71■□□□□ 0.75
SSR2P43308 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR2P43308 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR2P43308 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SSR2P43308 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR2P43308 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR2P43308 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SSR2P43308 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR2P43308 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.7■□□□□ 0.74
SSR2P43308 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR2P43308 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR2P43308 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.7■□□□□ 0.74
SSR2P43308 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR2P43308 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR2P43308 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR2P43308 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR2P43308 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR2P43308 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.7■□□□□ 0.74
SSR2P43308 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSR2P43308 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.7■□□□□ 0.74
SSR2P43308 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SSR2P43308 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.7■□□□□ 0.74
SSR2P43308 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.7■□□□□ 0.74
SSR2P43308 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSR2P43308 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.7■□□□□ 0.74
SSR2P43308 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SSR2P43308 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR2P43308 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR2P43308 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR2P43308 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR2P43308 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.69■□□□□ 0.74
SSR2P43308 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.69■□□□□ 0.74
SSR2P43308 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSR2P43308 RBM17P2-201ENST00000616397 1405 ntBASIC19.69■□□□□ 0.74
SSR2P43308 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSR2P43308 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSR2P43308 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSR2P43308 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSR2P43308 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.69■□□□□ 0.74
SSR2P43308 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSR2P43308 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSR2P43308 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSR2P43308 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SSR2P43308 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SSR2P43308 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSR2P43308 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SSR2P43308 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
SSR2P43308 PLK5-205ENST00000642079 1969 ntBASIC19.68■□□□□ 0.74
SSR2P43308 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SSR2P43308 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSR2P43308 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.68■□□□□ 0.74
SSR2P43308 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSR2P43308 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSR2P43308 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SSR2P43308 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSR2P43308 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SSR2P43308 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.68■□□□□ 0.74
SSR2P43308 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SSR2P43308 AC243732.1-201ENST00000612648 864 ntBASIC19.68■□□□□ 0.74
SSR2P43308 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
SSR2P43308 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSR2P43308 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSR2P43308 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.68■□□□□ 0.74
SSR2P43308 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.68■□□□□ 0.74
SSR2P43308 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSR2P43308 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSR2P43308 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.67■□□□□ 0.74
SSR2P43308 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR2P43308 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSR2P43308 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR2P43308 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR2P43308 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSR2P43308 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR2P43308 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR2P43308 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.67■□□□□ 0.74
SSR2P43308 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SSR2P43308 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.67■□□□□ 0.74
SSR2P43308 AC006128.1-201ENST00000624704 1661 ntBASIC19.67■□□□□ 0.74
SSR2P43308 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SSR2P43308 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR2P43308 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSR2P43308 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.67■□□□□ 0.74
SSR2P43308 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
SSR2P43308 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.66■□□□□ 0.74
SSR2P43308 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SSR2P43308 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SSR2P43308 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.66■□□□□ 0.74
SSR2P43308 AC010536.3-201ENST00000620306 533 ntBASIC19.66■□□□□ 0.74
SSR2P43308 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SSR2P43308 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms