Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RPL13AP40429 SPCS2P3-201ENST00000500401 656 ntBASIC14.28□□□□□ -0.12
RPL13AP40429 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC14.28□□□□□ -0.12
RPL13AP40429 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.28□□□□□ -0.12
RPL13AP40429 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPL13AP40429 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC14.28□□□□□ -0.12
RPL13AP40429 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.28□□□□□ -0.12
RPL13AP40429 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
RPL13AP40429 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.28□□□□□ -0.12
RPL13AP40429 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RPL13AP40429 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RPL13AP40429 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPL13AP40429 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPL13AP40429 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.27□□□□□ -0.12
RPL13AP40429 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPL13AP40429 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.27□□□□□ -0.12
RPL13AP40429 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.27□□□□□ -0.12
RPL13AP40429 LETM1P2-201ENST00000597330 2178 ntBASIC14.27□□□□□ -0.12
RPL13AP40429 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPL13AP40429 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.27□□□□□ -0.12
RPL13AP40429 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPL13AP40429 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPL13AP40429 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPL13AP40429 AC144652.1-201ENST00000609974 1624 ntBASIC14.27□□□□□ -0.12
RPL13AP40429 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPL13AP40429 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.27□□□□□ -0.13
RPL13AP40429 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.27□□□□□ -0.13
RPL13AP40429 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RPL13AP40429 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
RPL13AP40429 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.27□□□□□ -0.13
RPL13AP40429 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPL13AP40429 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPL13AP40429 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPL13AP40429 FEM1AP1-201ENST00000431297 1995 ntBASIC14.27□□□□□ -0.13
RPL13AP40429 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPL13AP40429 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RPL13AP40429 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPL13AP40429 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPL13AP40429 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPL13AP40429 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPL13AP40429 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.27□□□□□ -0.13
RPL13AP40429 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
RPL13AP40429 AC087289.5-201ENST00000586076 3175 ntBASIC14.26□□□□□ -0.13
RPL13AP40429 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL13AP40429 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL13AP40429 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RPL13AP40429 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL13AP40429 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL13AP40429 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL13AP40429 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL13AP40429 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL13AP40429 AC019171.1-201ENST00000601251 1056 ntBASIC14.26□□□□□ -0.13
RPL13AP40429 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL13AP40429 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPL13AP40429 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RPL13AP40429 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.26□□□□□ -0.13
RPL13AP40429 OR6D1P-203ENST00000641209 4860 ntBASIC14.26□□□□□ -0.13
RPL13AP40429 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL13AP40429 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPL13AP40429 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RPL13AP40429 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL13AP40429 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.25□□□□□ -0.13
RPL13AP40429 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.25□□□□□ -0.13
RPL13AP40429 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL13AP40429 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.25□□□□□ -0.13
RPL13AP40429 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RPL13AP40429 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPL13AP40429 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RPL13AP40429 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RPL13AP40429 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.25□□□□□ -0.13
RPL13AP40429 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPL13AP40429 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.25□□□□□ -0.13
RPL13AP40429 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
RPL13AP40429 AC087393.1-201ENST00000582896 145 ntBASIC14.25□□□□□ -0.13
RPL13AP40429 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL13AP40429 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL13AP40429 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RPL13AP40429 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPL13AP40429 AC026471.1-201ENST00000564629 3026 ntBASIC14.25□□□□□ -0.13
RPL13AP40429 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPL13AP40429 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL13AP40429 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
RPL13AP40429 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL13AP40429 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.24□□□□□ -0.13
RPL13AP40429 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPL13AP40429 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.24□□□□□ -0.13
RPL13AP40429 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL13AP40429 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL13AP40429 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RPL13AP40429 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL13AP40429 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL13AP40429 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC14.24□□□□□ -0.13
RPL13AP40429 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL13AP40429 RPS2P7-201ENST00000447334 885 ntBASIC14.24□□□□□ -0.13
RPL13AP40429 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPL13AP40429 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.24□□□□□ -0.13
RPL13AP40429 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL13AP40429 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPL13AP40429 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPL13AP40429 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms