Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
COL8A2P25067 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
COL8A2P25067 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL8A2P25067 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL8A2P25067 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
COL8A2P25067 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL8A2P25067 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.49■□□□□ 0.39
COL8A2P25067 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
COL8A2P25067 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
COL8A2P25067 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL8A2P25067 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
COL8A2P25067 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
COL8A2P25067 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL8A2P25067 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
COL8A2P25067 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL8A2P25067 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL8A2P25067 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.48■□□□□ 0.39
COL8A2P25067 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL8A2P25067 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.48■□□□□ 0.39
COL8A2P25067 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.48■□□□□ 0.39
COL8A2P25067 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL8A2P25067 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
COL8A2P25067 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
COL8A2P25067 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL8A2P25067 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL8A2P25067 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL8A2P25067 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.47■□□□□ 0.39
COL8A2P25067 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.47■□□□□ 0.39
COL8A2P25067 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
COL8A2P25067 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL8A2P25067 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL8A2P25067 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL8A2P25067 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL8A2P25067 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.47■□□□□ 0.39
COL8A2P25067 FAM21FP-204ENST00000608637 956 ntBASIC17.47■□□□□ 0.39
COL8A2P25067 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL8A2P25067 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL8A2P25067 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL8A2P25067 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL8A2P25067 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL8A2P25067 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL8A2P25067 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.46■□□□□ 0.39
COL8A2P25067 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL8A2P25067 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.46■□□□□ 0.39
COL8A2P25067 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL8A2P25067 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
COL8A2P25067 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.46■□□□□ 0.39
COL8A2P25067 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
COL8A2P25067 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.46■□□□□ 0.39
COL8A2P25067 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL8A2P25067 AL355472.2-201ENST00000422958 438 ntBASIC17.46■□□□□ 0.39
COL8A2P25067 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.46■□□□□ 0.39
COL8A2P25067 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.46■□□□□ 0.39
COL8A2P25067 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.46■□□□□ 0.39
COL8A2P25067 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.46■□□□□ 0.39
COL8A2P25067 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL8A2P25067 AC092118.2-201ENST00000613495 667 ntBASIC17.46■□□□□ 0.39
COL8A2P25067 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
COL8A2P25067 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL8A2P25067 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL8A2P25067 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL8A2P25067 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL8A2P25067 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
COL8A2P25067 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
COL8A2P25067 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL8A2P25067 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.45■□□□□ 0.38
COL8A2P25067 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL8A2P25067 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL8A2P25067 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.45■□□□□ 0.38
COL8A2P25067 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.45■□□□□ 0.38
COL8A2P25067 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL8A2P25067 AL024507.2-201ENST00000606070 2574 ntBASIC17.45■□□□□ 0.38
COL8A2P25067 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL8A2P25067 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
COL8A2P25067 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL8A2P25067 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL8A2P25067 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL8A2P25067 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.44■□□□□ 0.38
COL8A2P25067 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL8A2P25067 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.44■□□□□ 0.38
COL8A2P25067 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.44■□□□□ 0.38
COL8A2P25067 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COL8A2P25067 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL8A2P25067 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.44■□□□□ 0.38
COL8A2P25067 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.44■□□□□ 0.38
COL8A2P25067 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.44■□□□□ 0.38
COL8A2P25067 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COL8A2P25067 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.44■□□□□ 0.38
COL8A2P25067 TSPY20P-201ENST00000450910 630 ntBASIC17.44■□□□□ 0.38
COL8A2P25067 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.44■□□□□ 0.38
COL8A2P25067 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.44■□□□□ 0.38
COL8A2P25067 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL8A2P25067 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.44■□□□□ 0.38
COL8A2P25067 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COL8A2P25067 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL8A2P25067 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
COL8A2P25067 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.43■□□□□ 0.38
COL8A2P25067 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COL8A2P25067 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
COL8A2P25067 FBXW4P1-201ENST00000426721 2239 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms