Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP11P24347 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.63■□□□□ 0.73
MMP11P24347 FEM1AP4-201ENST00000443167 1987 ntBASIC19.63■□□□□ 0.73
MMP11P24347 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.63■□□□□ 0.73
MMP11P24347 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MMP11P24347 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MMP11P24347 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MMP11P24347 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MMP11P24347 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MMP11P24347 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.63■□□□□ 0.73
MMP11P24347 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MMP11P24347 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MMP11P24347 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.63■□□□□ 0.73
MMP11P24347 AL162412.1-201ENST00000567129 965 ntBASIC19.63■□□□□ 0.73
MMP11P24347 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.63■□□□□ 0.73
MMP11P24347 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MMP11P24347 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.63■□□□□ 0.73
MMP11P24347 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP11P24347 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MMP11P24347 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
MMP11P24347 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP11P24347 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MMP11P24347 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP11P24347 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP11P24347 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP11P24347 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.62■□□□□ 0.73
MMP11P24347 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP11P24347 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP11P24347 AC073210.2-201ENST00000430369 194 ntBASIC19.62■□□□□ 0.73
MMP11P24347 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.62■□□□□ 0.73
MMP11P24347 AC133041.1-202ENST00000642053 222 ntBASIC19.62■□□□□ 0.73
MMP11P24347 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MMP11P24347 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
MMP11P24347 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.62■□□□□ 0.73
MMP11P24347 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MMP11P24347 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP11P24347 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MMP11P24347 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MMP11P24347 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP11P24347 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MMP11P24347 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
MMP11P24347 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP11P24347 AL512625.2-201ENST00000417533 625 ntBASIC19.61■□□□□ 0.73
MMP11P24347 AC069152.1-201ENST00000438030 544 ntBASIC19.61■□□□□ 0.73
MMP11P24347 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MMP11P24347 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
MMP11P24347 AL591742.1-201ENST00000604433 565 ntBASIC19.61■□□□□ 0.73
MMP11P24347 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP11P24347 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP11P24347 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.61■□□□□ 0.73
MMP11P24347 MKRN4P-201ENST00000444706 1521 ntBASIC19.61■□□□□ 0.73
MMP11P24347 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP11P24347 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP11P24347 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP11P24347 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.6■□□□□ 0.73
MMP11P24347 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.6■□□□□ 0.73
MMP11P24347 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP11P24347 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MMP11P24347 CD99P1-205ENST00000527459 561 ntBASIC19.6■□□□□ 0.73
MMP11P24347 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP11P24347 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MMP11P24347 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP11P24347 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MMP11P24347 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP11P24347 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MMP11P24347 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
MMP11P24347 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP11P24347 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
MMP11P24347 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.6■□□□□ 0.73
MMP11P24347 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
MMP11P24347 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP11P24347 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP11P24347 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
MMP11P24347 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.59■□□□□ 0.73
MMP11P24347 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP11P24347 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP11P24347 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
MMP11P24347 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP11P24347 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP11P24347 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.59■□□□□ 0.73
MMP11P24347 MIR4758-201ENST00000577688 71 ntBASIC19.59■□□□□ 0.73
MMP11P24347 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP11P24347 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
MMP11P24347 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.59■□□□□ 0.73
MMP11P24347 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MMP11P24347 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP11P24347 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
MMP11P24347 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP11P24347 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP11P24347 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.59■□□□□ 0.73
MMP11P24347 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP11P24347 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP11P24347 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MMP11P24347 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MMP11P24347 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
MMP11P24347 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MMP11P24347 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MMP11P24347 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MMP11P24347 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MMP11P24347 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms