Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 LETM1P2-201ENST00000597330 2178 ntBASIC12.84□□□□□ -0.35
PDE6GP18545 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC12.84□□□□□ -0.35
PDE6GP18545 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
PDE6GP18545 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC12.84□□□□□ -0.35
PDE6GP18545 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
PDE6GP18545 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PDE6GP18545 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC12.84□□□□□ -0.35
PDE6GP18545 AC027702.1-201ENST00000563810 1770 ntBASIC12.84□□□□□ -0.35
PDE6GP18545 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PDE6GP18545 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PDE6GP18545 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
PDE6GP18545 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PDE6GP18545 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
PDE6GP18545 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC12.83□□□□□ -0.36
PDE6GP18545 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PDE6GP18545 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC12.83□□□□□ -0.36
PDE6GP18545 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PDE6GP18545 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PDE6GP18545 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC12.83□□□□□ -0.36
PDE6GP18545 HTR7P1-202ENST00000624664 4411 ntBASIC12.83□□□□□ -0.36
PDE6GP18545 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PDE6GP18545 LSM7-203ENST00000585409 512 ntTSL 2 BASIC12.83□□□□□ -0.36
PDE6GP18545 GAK-223ENST00000628912 497 ntTSL 5 BASIC12.83□□□□□ -0.36
PDE6GP18545 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
PDE6GP18545 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
PDE6GP18545 AL162377.1-201ENST00000618844 1793 ntBASIC12.83□□□□□ -0.36
PDE6GP18545 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
PDE6GP18545 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC12.83□□□□□ -0.36
PDE6GP18545 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PDE6GP18545 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
PDE6GP18545 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PDE6GP18545 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC12.83□□□□□ -0.36
PDE6GP18545 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
PDE6GP18545 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PDE6GP18545 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
PDE6GP18545 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
PDE6GP18545 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.82□□□□□ -0.36
PDE6GP18545 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC12.82□□□□□ -0.36
PDE6GP18545 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PDE6GP18545 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
PDE6GP18545 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC12.82□□□□□ -0.36
PDE6GP18545 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PDE6GP18545 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC12.82□□□□□ -0.36
PDE6GP18545 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PDE6GP18545 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
PDE6GP18545 AP000974.1-201ENST00000623909 2387 ntBASIC12.81□□□□□ -0.36
PDE6GP18545 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 USP45-205ENST00000472914 1617 ntTSL 5 BASIC12.81□□□□□ -0.36
PDE6GP18545 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 AC116562.4-201ENST00000641316 2276 ntBASIC12.81□□□□□ -0.36
PDE6GP18545 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
PDE6GP18545 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 MLEC-202ENST00000412616 841 ntTSL 3 BASIC12.81□□□□□ -0.36
PDE6GP18545 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 AC120498.9-201ENST00000339021 3867 ntBASIC12.81□□□□□ -0.36
PDE6GP18545 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC12.81□□□□□ -0.36
PDE6GP18545 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC12.81□□□□□ -0.36
PDE6GP18545 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PDE6GP18545 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PDE6GP18545 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC12.81□□□□□ -0.36
PDE6GP18545 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC12.81□□□□□ -0.36
PDE6GP18545 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PDE6GP18545 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.8□□□□□ -0.36
PDE6GP18545 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6GP18545 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PDE6GP18545 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
PDE6GP18545 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6GP18545 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6GP18545 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6GP18545 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6GP18545 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PDE6GP18545 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms